RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 MAP2K5Q13163 448 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 HHATQ5VTY9 493 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 ZNF276Q8N554 614 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 APPL2Q8NEU8 664 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 TCP10LQ8TDR4 215 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 CFAP36Q96G28 342 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 ZNF570Q96NI8 536 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 CHKBQ9Y259 395 aa20.85■□□□□ 0.93
SPG7-202ENST00000341316 CFAP69A5D8W1 941 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 KIF1CO43896 1103 aaKnown RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 EDF1O60869 148 aaKnown RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 ZWINTO95229 277 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 CELF2O95319 508 aaKnown RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 APRTP07741 180 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 MYL3P08590 195 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 ATP2A2P16615 1042 aaKnown RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 TAF6P49848 677 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 SLC8A3P57103 927 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 FAAP100Q0VG06 881 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 SETDB1Q15047 1291 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 SLC44A1Q8WWI5 657 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 SERAC1Q96JX3 654 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 CSPG4P5Q96PW8 444 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 POPDC2Q9HBU9 364 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 TRIP12Q14669 1992 aaPredicted RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 PDCD11Q14690 1871 aaKnown RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 WDR91A4D1P6 747 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 FAM155BO75949 473 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 LILRA4P59901 499 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 PTK7Q13308 1070 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 ADGRF2Q8IZF7 708 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 MAB21L3Q8N8X9 362 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 LRRC8CQ8TDW0 803 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 ZNF75CPQ92670 426 aaPredicted RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 ZNF560Q96MR9 790 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 RAB3IPQ96QF0 476 aaPredicted RBP20.84■□□□□ 0.93
SPG7-202ENST00000341316 CACNG4Q9UBN1 327 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 TTLL3Q9Y4R7 772 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 USH1CQ9Y6N9 552 aa20.84■□□□□ 0.93
SPG7-202ENST00000341316 ZNF487B1APH4 448 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 CLDN5O00501 218 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 BEST1O76090 585 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 FKBP1BP68106 108 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 PITX1P78337 314 aaPredicted RBP20.83■□□□□ 0.93
SPG7-202ENST00000341316 CBLBQ13191 982 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 GPR162Q16538 588 aa20.83■□□□□ 0.93
SPG7-202ENST00000341316 TRIM56Q9BRZ2 755 aaKnown RBP20.83■□□□□ 0.93
SPG7-202ENST00000341316 CXorf49A8MYA2 514 aaPredicted RBP20.83■□□□□ 0.92
SPG7-202ENST00000341316 DESP17661 470 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 AMPD1P23109 780 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 ACAT1P24752 427 aaKnown RBP20.83■□□□□ 0.92
SPG7-202ENST00000341316 TARSP26639 723 aaKnown RBP20.83■□□□□ 0.92
SPG7-202ENST00000341316 MAGEA6P43360 314 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 SLC45A4Q5BKX6 768 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 KCNT2Q6UVM3 1135 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 SH2D5Q6ZV89 423 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 ZNF534Q76KX8 674 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 ARCQ7LC44 396 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 PIGZQ86VD9 579 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 TMEM237Q96Q45 408 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 KLC2Q9H0B6 622 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 TMPRSS4Q9NRS4 437 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.83■□□□□ 0.92
SPG7-202ENST00000341316 USP3Q9Y6I4 520 aa20.83■□□□□ 0.92
SPG7-202ENST00000341316 PTGESO14684 152 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 GOT1P17174 413 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 SCNN1AP37088 669 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 NCBP2-AS2Q69YL0 99 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 OTOAQ7RTW8 1153 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 FAM131BQ86XD5 332 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 C2orf69Q8N8R5 385 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 NETO2Q8NC67 525 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 B3GALNT2Q8NCR0 500 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 ZFP42Q96MM3 310 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 LRRC37BQ96QE4 947 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 LRMDAQ9H2I8 198 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 HAO1Q9UJM8 370 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 ZNF236Q9UL36 1845 aa20.82■□□□□ 0.92
SPG7-202ENST00000341316 MEIS3P2A8K0S8 358 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 PNPLA4P41247 253 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 ADIGQ0VDE8 80 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 OTUD1Q5VV17 481 aaPredicted RBP20.81■□□□□ 0.92
SPG7-202ENST00000341316 CDKL3Q8IVW4 592 aaPredicted RBP20.81■□□□□ 0.92
SPG7-202ENST00000341316 DEFB106AQ8N104 65 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 HSFY1Q96LI6 401 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 PNPLA8Q9NP80 782 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 DTLQ9NZJ0 730 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 ZC3H7BQ9UGR2 993 aaKnown RBP20.81■□□□□ 0.92
SPG7-202ENST00000341316 GTF2IRD1Q9UHL9 959 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 HUS1O60921 280 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 WFS1O76024 890 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 MT-ND3P03897 115 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 ACADSBP45954 432 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 CRYBB1P53674 252 aaPredicted RBP20.81■□□□□ 0.92
SPG7-202ENST00000341316 SV2CQ496J9 727 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 PAQR9Q6ZVX9 377 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 ALG13Q9NP73 1137 aaKnown RBP20.81■□□□□ 0.92
SPG7-202ENST00000341316 CYLDQ9NQC7 956 aa20.81■□□□□ 0.92
SPG7-202ENST00000341316 SMYD2Q9NRG4 433 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms