RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 SLC35G2Q8TBE7 412 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 KIFC3Q9BVG8 833 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PCIF1Q9H4Z3 704 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 AGPAT3Q9NRZ7 376 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 IGSF9Q9P2J2 1179 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 POU2F3Q9UKI9 436 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PCDHGA3Q9Y5H0 932 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
RTN3-203ENST00000341307 HTTP42858 3142 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 MCF2LO15068 1137 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 KMOO15229 486 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CRTAMO95727 393 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 ENO1P06733 434 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 TRIM49P0CI25 452 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 TRIM49CP0CI26 452 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 FDX1P10109 184 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CA4P22748 312 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 GJA5P36382 358 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 VEGFBP49765 207 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CCNIQ14094 377 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 GRAMD1BQ3KR37 738 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 XKR9Q5GH70 373 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 NOL9Q5SY16 702 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 RWDD4Q6NW29 188 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 LVRNQ6Q4G3 990 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 ITIH5Q86UX2 942 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CCDC105Q8IYK2 499 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 ZSWIM2Q8NEG5 633 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 NSUN6Q8TEA1 469 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 OTUD5Q96G74 571 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CNBD2Q96M20 576 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 ACAD9Q9H845 621 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 KCND2Q9NZV8 630 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 PADI4Q9UM07 663 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 INPP5FQ9Y2H2 1132 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 FAM170AA1A519 330 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 WDR64B1ANS9 1081 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 TMX2-CTNND1H3BSU7 103 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 TYROBPO43914 113 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 EIF2S1P05198 315 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 ENO2P09104 434 aaPredicted RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 HMOX2P30519 316 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 ALDH3B2P48448 385 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 MARCKSL1P49006 195 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 CTAG1AP78358 180 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 OGFRL1Q5TC84 451 aaPredicted RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 DCUN1D1Q96GG9 259 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 OXNAD1Q96HP4 312 aaPredicted RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 TRIM55Q9BYV6 548 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 SNX25Q9H3E2 840 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 HOXC10Q9NYD6 342 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 WHRNQ9P202 907 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 MTO1Q9Y2Z2 717 aaKnown RBP12.26□□□□□ -0.45
RTN3-203ENST00000341307 DTNAQ9Y4J8 743 aa12.26□□□□□ -0.45
RTN3-203ENST00000341307 NCANO14594 1321 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 KRBA1A5PL33 1030 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 CHEK2O96017 543 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SRGAP2BP0DMP2 458 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 ZNF23P17027 643 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 ENPP1P22413 925 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 AP3M2P53677 418 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 OAZ1P54368 228 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 ARL4CP56559 192 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 PEX3P56589 373 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 PSMC5P62195 406 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 TUBA1BP68363 451 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 IFITM2Q01629 132 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SP2Q02086 613 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 CNGA3Q16281 694 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 PKN2Q16513 984 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 CRY1Q16526 586 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 CYP1B1Q16678 543 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 TIGD2Q4W5G0 525 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 MDH1BQ5I0G3 518 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 LDLRAD1Q5T700 205 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 FAM102BQ5T8I3 360 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 GADL1Q6ZQY3 521 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 TUBA1AQ71U36 451 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 OSTM1Q86WC4 334 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 RHOT2Q8IXI1 618 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 OLIG1Q8TAK6 271 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SLC26A7Q8TE54 656 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 GABBR1Q9UBS5 961 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SMG5Q9UPR3 1016 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 AP4B1Q9Y6B7 739 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 WDR91A4D1P6 747 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 TBKBP1A7MCY6 615 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 A8MU76 341 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 SLC16A4O15374 487 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 RSL1D1O76021 490 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 DLDP09622 509 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 UCHL3P15374 230 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 PSMC2P35998 433 aaKnown RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 ZNF200P98182 395 aaPredicted RBP12.25□□□□□ -0.45
RTN3-203ENST00000341307 STAT4Q14765 748 aa12.25□□□□□ -0.45
RTN3-203ENST00000341307 CLUL1Q15846 466 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms