RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 ITGB3P05106 788 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 C6orf222P0C671 652 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 IGBP1P78318 339 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CLDN10P78369 228 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SLC25A3Q00325 362 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 DEFB107AQ8IZN7 70 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 GDPD5Q8WTR4 605 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ZFAND2BQ8WV99 257 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 DHX33Q9H6R0 707 aaKnown RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ELP3Q9H9T3 547 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 BFARQ9NZS9 450 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 KIAA1257Q9ULG3 409 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CNTN6Q9UQ52 1028 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PTPRJQ12913 1337 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF541Q9H0D2 1346 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 TRPA1O75762 1119 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 HMGCRP04035 888 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PROCP04070 461 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 RALBP11234 206 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 RANBP1P43487 201 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 COG7P83436 770 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 UBAP2LQ14157 1087 aaKnown RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ANKRD20A4Q4UJ75 823 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PDPK2PQ6A1A2 396 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 TAS1R3Q7RTX0 852 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CDR2LQ86X02 465 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 MIPOL1Q8TD10 442 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 FAM172AQ8WUF8 416 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CPXM1Q96SM3 734 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CYLDQ9NQC7 956 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SDR42E2A6NKP2 422 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PDE5AO76074 875 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SAT1P21673 171 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 IL1R2P27930 398 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CRHR1P34998 444 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 FDFT1P37268 417 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 OAZ1P54368 228 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 BACE1P56817 501 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 PPP1R15BQ5SWA1 713 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ARHGAP22Q7Z5H3 698 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 GSTCDQ8NEC7 633 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 CMASQ8NFW8 434 aaPredicted RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 ACMSDQ8TDX5 336 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 HPDLQ96IR7 371 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 EBNA1BP2Q99848 306 aaKnown RBP9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SLC7A8Q9UHI5 535 aa9.74□□□□□ -0.85
TRERF1-201ENST00000340840 SPATA31C2B4DYI2 1134 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 KCNA4P22459 653 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 ARL2P36404 184 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 RBP5P82980 135 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SLC25A11Q02978 314 aaKnown RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 TBL3Q12788 808 aaKnown RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SMAD1Q15797 465 aaKnown RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 DBN1Q16643 649 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 C16orf89Q6UX73 402 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 OPTNQ96CV9 577 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 TEX264Q9Y6I9 313 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 COMMD3-BMI1R4GMX3 469 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 COL2A1P02458 1487 aaPredicted RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 AIM2O14862 343 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 USP1O94782 785 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SPRP35270 261 aaPredicted RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF132P52740 706 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 XIAPP98170 497 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 ZNF252P-AS1Q0IIN9 211 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 LAMTOR4Q0VGL1 99 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 LIN52Q52LA3 116 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 C16orf46Q6P387 395 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 XYLT1Q86Y38 959 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SLC4A11Q8NBS3 891 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 PGBD4Q96DM1 585 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 S100A14Q9HCY8 104 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 AKT3Q9Y243 479 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SYNJ2BP-COX16A0A087WUM0 186 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 CYB561D2O14569 222 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 POLBP06746 335 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 CXCL8P10145 99 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 CDC16Q13042 620 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 TAF1CQ15572 869 aaPredicted RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 UNC5AQ6ZN44 842 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 SETD3Q86TU7 594 aaPredicted RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 AGR3Q8TD06 166 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 GORASP1Q9BQQ3 440 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 DHRS4Q9BTZ2 278 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 COX16Q9P0S2 106 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 KLHL8Q9P2G9 620 aaPredicted RBP9.73□□□□□ -0.85
TRERF1-201ENST00000340840 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
TRERF1-201ENST00000340840 YDJCA8MPS7 323 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 IL1BP01584 269 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 CPA3P15088 417 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 RAG1P15918 1043 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 TCF7P36402 384 aaPredicted RBP9.72□□□□□ -0.85
TRERF1-201ENST00000340840 CDK7P50613 346 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 SLC12A2P55011 1212 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 TMEM132DQ14C87 1099 aa9.72□□□□□ -0.85
TRERF1-201ENST00000340840 C15orf59Q2T9L4 293 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms