RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 KLC1Q07866 573 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 ORC1Q13415 861 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 KCNT1Q5JUK3 1230 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 MRNIPQ6NTE8 343 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 UXTQ9UBK9 157 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-201ENST00000340748 TM9SF1O15321 606 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
DNMT1-201ENST00000340748 AAK1Q2M2I8 961 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 ZPBP2Q6X784 338 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-201ENST00000340748 DNAJC9Q8WXX5 260 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 SLC35C1Q96A29 364 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 EME1Q96AY2 570 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 CORO1BQ9BR76 489 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 RAB21Q9UL25 225 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 ST3GAL5Q9UNP4 418 aa13.24□□□□□ -0.29
DNMT1-201ENST00000340748 DRG1Q9Y295 367 aaKnown RBP13.24□□□□□ -0.29
DNMT1-201ENST00000340748 PIK3CDO00329 1044 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 HNRNPRO43390 633 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 CYP2C18P33260 490 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ZRANB3Q5FWF4 1079 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 AARS2Q5JTZ9 985 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 C6orf10Q5SRN2 563 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SLC26A11Q86WA9 606 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 HOMEZQ8IX15 550 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SNX31Q8N9S9 440 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 FBXO25Q8TCJ0 367 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 GFM2Q969S9 779 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 MTMR8Q96EF0 704 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 PAFAH2Q99487 392 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 NCAM2O15394 837 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 CAND2O75155 1236 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SCNN1GP51170 649 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ACLYP53396 1101 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 FAXCQ5TGI0 409 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 RRM2BQ7LG56 351 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 TBCBQ99426 244 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 AVENQ9NQS1 362 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 BARX2Q9UMQ3 279 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 C2orf81A6NN90 581 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 CCND3P30281 292 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 STX5Q13190 355 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ZNF177Q13360 481 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 NUP93Q8N1F7 819 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SF3B1O75533 1304 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■■■■■ 110.9
DNMT1-201ENST00000340748 NDUFS2O75306 463 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 MLH1P40692 756 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 VCPP55072 806 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 USP41Q3LFD5 358 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 PATL1Q86TB9 770 aaKnown RBP13.23□□□□□ -0.29
DNMT1-201ENST00000340748 NT5DC4Q86YG4 428 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 ARHGEF19Q8IW93 802 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 RXFP2Q8WXD0 754 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 SHOC2Q9UQ13 582 aa13.23□□□□□ -0.29
DNMT1-201ENST00000340748 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 C5orf58C9J3I9 102 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 F5H5T6 163 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 GLUD1P00367 558 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 GLI1P08151 1106 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 C2CD6Q53TS8 623 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 HERC6Q8IVU3 1022 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TATDN2Q93075 761 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 ASAH2Q9NR71 780 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 DMGDHQ9UI17 866 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 PCDHA3Q9Y5H8 950 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 CHRM3P20309 590 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 FLOT2Q14254 428 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 NLRP9Q7RTR0 991 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 MAP4K3Q8IVH8 894 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 ASB7Q9H672 318 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 CHST12Q9NRB3 414 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 BLOC1S6Q9UL45 172 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 STX7O15400 261 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 PMPCBO75439 489 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 HSPA13P48723 471 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 MTM1Q13496 603 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 SPDYE7PQ495Y7 208 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 SPDYCQ5MJ68 293 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TMEM121Q9BTD3 319 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 RRN3Q9NYV6 651 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 CYTH3O43739 400 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 PAEPP09466 180 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 SERPINB10P48595 397 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 ILF2Q12905 390 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TTLL9Q3SXZ7 439 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 SUGP1Q8IWZ8 645 aaKnown RBP13.22□□□□□ -0.29
DNMT1-201ENST00000340748 TAGAPQ8N103 731 aa13.22□□□□□ -0.29
DNMT1-201ENST00000340748 RIPOR3Q96MK2 946 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms