RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DNAJC3Q13217 504 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 ZBTB6Q15916 424 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 DEFB115Q30KQ5 88 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 PID1Q7Z2X4 250 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 SRLQ86TD4 932 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 ZNF280BQ86YH2 543 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 MIB1Q86YT6 1006 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 CCHCR1Q8TD31 782 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 CHMP6Q96FZ7 201 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 DUSP16Q9BY84 665 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 IQCGQ9H095 443 aaKnown RBP10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 KLC2Q9H0B6 622 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 ETNK1Q9HBU6 452 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 PIGVQ9NUD9 493 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC38A7Q9NVC3 462 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC12A6Q9UHW9 1150 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 MYO9BQ13459 2157 aa10.55□□□□□ -0.72
RBFOX1-202ENST00000340209 MDM4O15151 490 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ITGAVP06756 1048 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 HOXD8P13378 290 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ATP2A2P16615 1042 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 KRT4P19013 534 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 EPHB2P29323 1055 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 DDR2Q16832 855 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SPOUT1Q5T280 376 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 IGDCC3Q8IVU1 814 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 UNC5BQ8IZJ1 945 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 VPS52Q8N1B4 723 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 PQLC3Q8N755 202 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 NIPA2Q8N8Q9 360 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 EIF1ADQ8N9N8 165 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 DNAAF3Q8N9W5 541 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 TTC17Q96AE7 1141 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 CSPG4P5Q96PW8 444 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 LRRC37A2A6NM11 1700 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SETSIPP0DME0 302 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ADAM17P78536 824 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 LPIN1Q14693 890 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 MORF4L2Q15014 288 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 EFHC1Q5JVL4 640 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 RHBDF2Q6PJF5 856 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 GLB1LQ6UWU2 654 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SPATA2LQ8IUW3 424 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ATP11CQ8NB49 1132 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 CMASQ8NFW8 434 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 PGBD4Q96DM1 585 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 PAFAH2Q99487 392 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ZC3H7BQ9UGR2 993 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 TLL2Q9Y6L7 1015 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM155AB1AL88 458 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM72CH0Y354 149 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 GOLGA8TH3BQL2 631 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ODC1P11926 461 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 ATP5DP30049 168 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 GRK4P32298 578 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 PHBP35232 272 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 GPR15P49685 360 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 MRPS5P82675 430 aaKnown RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM72AQ5TYM5 149 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM72DQ6L9T8 149 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 TMEM110Q86TL2 294 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FAM72BQ86X60 149 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 FNIP1Q8TF40 1166 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SMOQ99835 787 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SENP6Q9GZR1 1112 aaPredicted RBP10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC27A5Q9Y2P5 690 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 NUP205Q92621 2012 aa10.54□□□□□ -0.72
RBFOX1-202ENST00000340209 UNCXA6NJT0 531 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 ATP9BO43861 1147 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 CPB1P15086 417 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 PCK1P35558 622 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 ACLYP53396 1101 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 GJA9P57773 515 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 TSPY1Q01534 308 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SLC10A2Q12908 348 aaPredicted RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 NOMO1Q15155 1222 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 KBTBD12Q3ZCT8 623 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 RNF139Q8WU17 664 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 USP6NLQ92738 828 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 NKD2Q969F2 451 aaPredicted RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SCLYQ96I15 445 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SEC16BQ96JE7 1060 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SEPT5Q99719 369 aaPredicted RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 TMLHEQ9NVH6 421 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 DNAJB4Q9UDY4 337 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SHOX2O60902 331 aaPredicted RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 TADA2AO75478 443 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 METTL18O95568 372 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 OVGP1Q12889 678 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 MPP2Q14168 576 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 GSTCDQ8NEC7 633 aa10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 CNOT10Q9H9A5 744 aaKnown RBP10.53□□□□□ -0.72
RBFOX1-202ENST00000340209 DDX20Q9UHI6 824 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms