RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 PKN2Q16513 984 aaKnown RBP16.04■□□□□ 0.16
MBD1-203ENST00000339998 NCBP2-AS2Q69YL0 99 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 C3orf62Q6ZUJ4 267 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 ECHDC2Q86YB7 292 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
MBD1-203ENST00000339998 GLT1D1Q96MS3 346 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 SERPINB12Q96P63 405 aa16.04■□□□□ 0.16
MBD1-203ENST00000339998 C12orf65Q9H3J6 166 aaKnown RBP16.04■□□□□ 0.16
MBD1-203ENST00000339998 THSD7BQ9C0I4 1608 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 A0A1W2PPM1 405 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 TRIM66O15016 1216 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 MFSD11O43934 449 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 INHAP05111 366 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 BRAFP15056 766 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 ELK3P41970 407 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 DAOAP59103 153 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 DEUP1Q05D60 604 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 NPY6RQ99463 290 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 KLF6Q99612 283 aaPredicted RBP16.03■□□□□ 0.16
MBD1-203ENST00000339998 ZNF670Q9BS34 389 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 ROPN1BQ9BZX4 212 aaPredicted RBP16.03■□□□□ 0.16
MBD1-203ENST00000339998 TSPYL1Q9H0U9 437 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 ROPN1Q9HAT0 212 aaPredicted RBP16.03■□□□□ 0.16
MBD1-203ENST00000339998 ETNK1Q9HBU6 452 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 FZD10Q9ULW2 581 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 HHLA1C9JL84 531 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 PBX3P40426 434 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 LHX1P48742 406 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 SNX16P57768 344 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 SH3TC2Q8TF17 1288 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 DEPDC1BQ8WUY9 529 aa16.03■□□□□ 0.16
MBD1-203ENST00000339998 ZNF623O75123 536 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 VAV1P15498 845 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 PTK7Q13308 1070 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 OLIG2Q13516 323 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 CLLU1OSQ5K130 101 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 LHX8Q68G74 356 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 TRAF7Q6Q0C0 670 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.02■□□□□ 0.16
MBD1-203ENST00000339998 FBF1Q8TES7 1133 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 POPDC2Q9HBU9 364 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 ARHGEF4Q9NR80 690 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 A0A087WUV0 522 aaPredicted RBP16.02■□□□□ 0.16
MBD1-203ENST00000339998 RASA4BC9J798 803 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 RASA4O43374 803 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 NOS2P35228 1153 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 RPAINQ86UA6 219 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 RSPH1Q8WYR4 309 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 EURLQ9NYK6 297 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 SEPT10Q9P0V9 454 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 USP3Q9Y6I4 520 aa16.02■□□□□ 0.16
MBD1-203ENST00000339998 CDH23Q9H251 3354 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 A0A1W2PQ45 241 aaPredicted RBP16.02■□□□□ 0.15
MBD1-203ENST00000339998 A0A1W2PQY0 241 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 GOLGA8RI6L899 631 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 DAB1O75553 588 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 ARL4CP56559 192 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 BHLHA9Q7RTU4 235 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 RELL1Q8IUW5 271 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 GPR152Q8TDT2 470 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 RNF139Q8WU17 664 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 DDIT4Q9NX09 232 aa16.02■□□□□ 0.15
MBD1-203ENST00000339998 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.15
MBD1-203ENST00000339998 EBAG9O00559 213 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 CDH16O75309 829 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 FAM107AO95990 144 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 CST5P28325 142 aaPredicted RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 STIP1P31948 543 aaKnown RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 NKX3-2P78367 333 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 TUSC3Q13454 348 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 KCNJ11Q14654 390 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 OVOS1Q6IE37 1185 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 STRADAQ7RTN6 431 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 ZNF598Q86UK7 904 aaKnown RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 MPP5Q8N3R9 675 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 MAML1Q92585 1016 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 PAIP2Q9BPZ3 127 aaKnown RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 STARD7Q9NQZ5 370 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 RABGEF1Q9UJ41 708 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 KBTBD13C9JR72 458 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 DESP17661 470 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 TGM2P21980 687 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 OR1G1P47890 313 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 GPR15P49685 360 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 NUMBP49757 651 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 CRADDP78560 199 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 STAT4Q14765 748 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 DENND5BQ6ZUT9 1274 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 PRPF39Q86UA1 669 aaKnown RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 PALM2Q8IXS6 379 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 PDIK1LQ8N165 341 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 TMEM86AQ8N2M4 240 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 CCNYQ8ND76 341 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 CFAP36Q96G28 342 aa16.01■□□□□ 0.15
MBD1-203ENST00000339998 WDR6Q9NNW5 1121 aaKnown RBP16.01■□□□□ 0.15
MBD1-203ENST00000339998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms