RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 NTSR2O95665 410 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 BCL10O95999 233 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 C6orf222P0C671 652 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L2P0CJ85 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L3P0CJ86 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L4P0CJ87 422 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L5P0CJ88 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L6P0CJ89 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4L7P0CJ90 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DRD4P21917 467 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 NR4A1P22736 598 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 SERPINB8P50452 374 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 CDC16Q13042 620 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 MGAT5BQ3V5L5 792 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 RSBN1Q5VWQ0 802 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 SCIMPQ6UWF3 145 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TSHZ1Q6ZSZ6 1077 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 COQ7Q99807 217 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 POLE3Q9NRF9 147 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 CYP39A1Q9NYL5 469 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DUX4Q9UBX2 424 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 PRR23AA6NEV1 266 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 EVPLLA8MZ36 301 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 UBDO15205 165 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 FOXP2O15409 715 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TMCC1O94876 653 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 VAPBO95292 243 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 CXCL8P10145 99 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 GHRP10912 638 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 PCNAP12004 261 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 CREB1P16220 341 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 ALOX12P18054 663 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TCF7P36402 384 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 CCNHP51946 323 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 HIRAP54198 1017 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 PPP3CAQ08209 521 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 PGS1Q32NB8 556 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 AARS2Q5JTZ9 985 aaKnown RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 MFSD4BQ5TF39 518 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 LPCAT4Q643R3 524 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TTC23LQ6PF05 361 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TFAP2DQ7Z6R9 452 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 PRELID2Q8N945 189 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 TRAPPC12Q8WVT3 735 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 ALG3Q92685 438 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 PRMT6Q96LA8 375 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 APBA2Q99767 749 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 WDCPQ9H6R7 721 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 A0A096LPK6 155 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DDTLA6NHG4 134 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 A8MX80 341 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 UBXN8O00124 270 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DNM1LO00429 736 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 DNALI1O14645 258 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 ABCB1P08183 1280 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 MZF1P28698 734 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 RBL1P28749 1068 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 NUP107P57740 925 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 CYP51A1Q16850 503 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 LRRC8DQ7L1W4 858 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 SIX5Q8N196 739 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 C3orf20Q8ND61 904 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 GSTCDQ8NEC7 633 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 ETNPPLQ8TBG4 499 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 MAGEE2Q8TD90 523 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 MED15Q96RN5 788 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 AGXT2Q9BYV1 514 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
RTN3-202ENST00000339997 NYAP2Q9P242 653 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 FZD1Q9UP38 647 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 SIK3Q9Y2K2 1263 aa8.93□□□□□ -0.98
RTN3-202ENST00000339997 LOC100506127A0A0U1RQW1 187 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 PIPSLA2A3N6 862 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 KIAA0391O15091 583 aaKnown RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 LYPLA1O75608 230 aaPredicted RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 B3GAT3O94766 335 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 GSTM1P09488 218 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 GZMAP12544 262 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 MAP3K10Q02779 954 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 MEA1Q16626 185 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 BHLHE22Q8NFJ8 381 aaPredicted RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 UBASH3BQ8TF42 649 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 RPRD1AQ96P16 312 aaPredicted RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 PLA2G12BQ9BX93 195 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 ABCG8Q9H221 673 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 TRIM39Q9HCM9 518 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 IL1RAPL1Q9NZN1 696 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 AP4E1Q9UPM8 1137 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 PTPRMP28827 1452 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 PSTPIP1O43586 416 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 CLASP2O75122 1294 aaKnown RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 LTFP02788 710 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 CDH2P19022 906 aaPredicted RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 PRIM2P49643 509 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 C15orf59Q2T9L4 293 aaPredicted RBP8.92□□□□□ -0.98
RTN3-202ENST00000339997 TKFCQ3LXA3 575 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 NAPEPLDQ6IQ20 393 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 EXD1Q8NHP7 514 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 CAPSLQ8WWF8 208 aa8.92□□□□□ -0.98
RTN3-202ENST00000339997 PGM2Q96G03 612 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms