RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 SSU72Q9NP77 194 aaKnown RBP12.85□□□□□ -0.35
RIOK3-201ENST00000339486 PNPOQ9NVS9 261 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 PLA2G4CQ9UP65 541 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 SORCS3Q9UPU3 1222 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 HBS1LQ9Y450 684 aaKnown RBP12.85□□□□□ -0.35
RIOK3-201ENST00000339486 C15orf38-AP3S2A0A0A6YYH1 394 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 CNTFP26441 200 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 WASHC5Q12768 1159 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 NRF1Q16656 503 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 GADL1Q6ZQY3 521 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 ARPINQ7Z6K5 226 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 STRA8Q7Z7C7 330 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 CCDC60Q8IWA6 550 aaPredicted RBP12.85□□□□□ -0.35
RIOK3-201ENST00000339486 TFB1MQ8WVM0 346 aaKnown RBP12.85□□□□□ -0.35
RIOK3-201ENST00000339486 APOL2Q9BQE5 337 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 DCUN1D5Q9BTE7 237 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 IL1RL2Q9HB29 575 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 PPM1HQ9ULR3 514 aa12.85□□□□□ -0.35
RIOK3-201ENST00000339486 CHADO15335 359 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TYROBPO43914 113 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 BPGMP07738 259 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 PDGFRBP09619 1106 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 T-ENOLP0DO92 83 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 GM2AP17900 193 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 HOXA10P31260 410 aaPredicted RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SLC18A1P54219 525 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 PTK2BQ14289 1009 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 GOLGA7BQ2TAP0 167 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 RWDD4Q6NW29 188 aaKnown RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 CYGBQ8WWM9 190 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 APBB2Q92870 758 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 VPS39Q96JC1 886 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 WRNIP1Q96S55 665 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 UBIAD1Q9Y5Z9 338 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 CICQ96RK0 1608 aaPredicted RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TCRBV7S3A2A0A539 114 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TPP1O14773 563 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SUPT20HL2P0C7V6 817 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MLH1P40692 756 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 PHKA2P46019 1235 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 ACTR3P61158 418 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 IL1RL1Q01638 556 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 PDAP1Q13442 181 aaKnown RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 ACAP1Q15027 740 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SUPT20HL1Q3ZLR7 823 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MSS51Q4VC12 460 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 C4orf22Q6V702 233 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 KDELC2Q7Z4H8 507 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 RTKN2Q8IZC4 609 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 EPAS1Q99814 870 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SPATA16Q9BXB7 569 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 NENFQ9UMX5 172 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MYH1P12882 1939 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 LRCH4O75427 683 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TSHRP16473 764 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TGM2P21980 687 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 CYP2F1P24903 491 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MGAT1P26572 445 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 DCTN2Q13561 401 aaKnown RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 PEX6Q13608 980 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 C16orf72Q14CZ0 275 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 MAPRE2Q15555 327 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 DACT2Q5SW24 774 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TTC33Q6PID6 262 aaPredicted RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 DENND1AQ8TEH3 1009 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 NAT14Q8WUY8 206 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SIKE1Q9BRV8 207 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 SYT11Q9BT88 431 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 TEX13BQ9BXU2 312 aa12.84□□□□□ -0.35
RIOK3-201ENST00000339486 UNKQ9C0B0 810 aaKnown RBP12.84□□□□□ -0.35
RIOK3-201ENST00000339486 IL10P22301 178 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TNFAIP2Q03169 654 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 USP4Q13107 963 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 HABP4Q5JVS0 413 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 RNF169Q8NCN4 708 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 PRR11Q96HE9 360 aaPredicted RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 TMEM79Q9BSE2 394 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 SEMA6AQ9H2E6 1030 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 CHD4Q14839 1912 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 GNGT2O14610 69 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 CCNE2O96020 404 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 PYGLP06737 847 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 COX4I1P13073 169 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 MAP4P27816 1152 aaKnown RBP12.83□□□□□ -0.36
RIOK3-201ENST00000339486 AVPR1AP37288 418 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 AQP4P55087 323 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 PTPN20Q4JDL3 420 aa12.83□□□□□ -0.36
RIOK3-201ENST00000339486 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms