RNA–Protein interactions for RNA: ENST00000338056.7

RUNDC3B-202, Transcript of RUN domain containing 3B, humanhuman

TSL 2 BASIC

Gene RUNDC3B, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-202ENST00000338056 CATSPERBQ9H7T0 1116 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 VTA1Q9NP79 307 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 MOSPD1Q9UJG1 213 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NOCTQ9UK39 431 aaKnown RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 RUVBL2Q9Y230 463 aaKnown RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NFASCO94856 1347 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 ARFGEF2Q9Y6D5 1785 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NCF1BA6NI72 391 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 ENO4A6NNW6 628 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NCF1CA8MVU1 366 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 USP2O75604 605 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NCF1P14598 390 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 PTPN7P35236 360 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 FSTL1Q12841 308 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 ITIH4Q14624 930 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 VEPH1Q14D04 833 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 RNF219Q5W0B1 726 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 PHF13Q86YI8 300 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 TMEM192Q8IY95 271 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 ZFP42Q96MM3 310 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 TSC22D3Q99576 134 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 FICDQ9BVA6 458 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 VPS33BQ9H267 617 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 FAM96AQ9H5X1 160 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 LRRC40Q9H9A6 602 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 LOC102724159A0A0B4J2E5 919 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 SOWAHBA6NEL2 793 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 CCND1P24385 295 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 FDFT1P37268 417 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 NUDT2P50583 147 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 PWP2Q15269 919 aaKnown RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 IMPG1Q17R60 797 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 FBXO32Q969P5 355 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 CCDC138Q96M89 665 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 OLA1Q9NTK5 396 aaKnown RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 DNAJC6O75061 913 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 VAPBO95292 243 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 RALBP11234 206 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 GOT1P17174 413 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 CHRM3P20309 590 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 DRG2P55039 364 aaKnown RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 KCNJ2P63252 427 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 ISLR2Q6UXK2 745 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 C1orf127Q8N9H9 656 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 GTF3C2Q8WUA4 911 aaPredicted RBP16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 PHF21BQ96EK2 531 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 VANGL2Q9ULK5 521 aa16.3■□□□□ 0.2
RUNDC3B-202ENST00000338056 DUOX1Q9NRD9 1551 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 RASGEF1CQ8N431 466 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 SHCBP1Q8NEM2 672 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 DNAJC9Q8WXX5 260 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 MRPL45Q9BRJ2 306 aaKnown RBP16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 PRDM12Q9H4Q4 367 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 SMPD4Q9NXE4 827 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 IL1RAPL1Q9NZN1 696 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 PACSIN3Q9UKS6 424 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 SLC12A8A0AV02 714 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 PHGDHO43175 533 aaKnown RBP16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 SETSIPP0DME0 302 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 PSEN2P49810 448 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 CSHL1Q14406 222 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 FUKQ8N0W3 1084 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 ZNF516Q92618 1163 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 NR2E3Q9Y5X4 410 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 GPR182O15218 404 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 GRIN3BO60391 1043 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 DNAJB2P25686 324 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 RABGGTBP53611 331 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 DCP1BQ8IZD4 617 aaKnown RBP16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 RNF157Q96PX1 679 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 APBA2Q99767 749 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 FRMD8Q9BZ67 464 aaPredicted RBP16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 TSPYL2Q9H2G4 693 aaPredicted RBP16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 RXFP1Q9HBX9 757 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 TUBGCP4Q9UGJ1 667 aa16.29■□□□□ 0.2
RUNDC3B-202ENST00000338056 LRCH4O75427 683 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 E2F6O75461 281 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 ERBB2P04626 1255 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 CPA3P15088 417 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 PSMB4P28070 264 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 CAPRIN1Q14444 709 aaKnown RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 SZRD1Q7Z422 152 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 TKTL2Q9H0I9 626 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 TELO2Q9Y4R8 837 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 HOXD10P28358 340 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 LBRQ14739 615 aaKnown RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 RBBP7Q16576 425 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 CTXN3Q4LDR2 81 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 ALLCQ8N6M5 410 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 SPDYE1Q8NFV5 336 aaPredicted RBP16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 OR52K1Q8NGK4 314 aa16.28■□□□□ 0.2
RUNDC3B-202ENST00000338056 TRIM62Q9BVG3 475 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms