RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ZBTB49Q6ZSB9 765 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 BDH2Q9BUT1 245 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 MROH7Q68CQ1 1323 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 PNMA8CA0A1B0GUJ8 204 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 SMIM31A0A1B0GVY4 71 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 IL6P05231 212 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 MPP3Q13368 585 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ENGASEQ8NFI3 743 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 WDR36Q8NI36 951 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 SGF29Q96ES7 293 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 MYLK2Q9H1R3 596 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 UBDO15205 165 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 SOX11P35716 441 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 OTUD4Q01804 1114 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 FUT11Q495W5 492 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 GRTP1Q5TC63 336 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 REXO1L1PQ8IX06 675 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 KYQ8NBH2 561 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 UBASH3BQ8TF42 649 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TMEM169Q96HH4 297 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 MPP4Q96JB8 637 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TINF2Q9BSI4 451 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 MSH4O15457 936 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 PEX1O43933 1283 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 KPNA6O60684 536 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 PABPC1P11940 636 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 R3HDM1Q15032 1099 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 RASA2Q15283 850 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 SPDYCQ5MJ68 293 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 ANKRD13AQ8IZ07 590 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 FBXO32Q969P5 355 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 KCTD14Q9BQ13 255 aaPredicted RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 IARS2Q9NSE4 1012 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 FAM58BPP0C7Q3 252 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 CRABP2P29373 138 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 SKIV2L2P42285 1042 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 AQP5P55064 265 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 NFE2Q16621 373 aaPredicted RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 LPCAT2Q7L5N7 544 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 STRA8Q7Z7C7 330 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TMPRSS6Q8IU80 811 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 SIX5Q8N196 739 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TDRD5Q8NAT2 981 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 MAGI3Q5TCQ9 1506 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 HPGDP15428 266 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 REPS1Q96D71 796 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TMEM120AQ9BXJ8 343 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 ABI2Q9NYB9 513 aaPredicted RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 SF3B1O75533 1304 aaKnown RBP eCLIP13.43□□□□□ -0.262e-6■■■■■ 101.7
HLCS-201ENST00000336648 SYNCRIPO60506 623 aaKnown RBP13.43□□□□□ -0.26
HLCS-201ENST00000336648 CDC40O60508 579 aaKnown RBP eCLIP13.43□□□□□ -0.26
HLCS-201ENST00000336648 CLTBP09497 229 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 PIK3CGP48736 1102 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 AMPD2Q01433 879 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 SLC25A24Q6NUK1 477 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 TAF8Q7Z7C8 310 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 LRRC71Q8N4P6 559 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 PI4K2AQ9BTU6 479 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 CHST12Q9NRB3 414 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 HAO1Q9UJM8 370 aa13.43□□□□□ -0.26
HLCS-201ENST00000336648 GRIN3BO60391 1043 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 TPST1O60507 370 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 BCAP31P51572 246 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 GALNTL6Q49A17 601 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 EPS8L3Q8TE67 593 aaKnown RBP13.42□□□□□ -0.26
HLCS-201ENST00000336648 FAM172AQ8WUF8 416 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 ATXN2LQ8WWM7 1075 aaKnown RBP13.42□□□□□ -0.26
HLCS-201ENST00000336648 UBA2Q9UBT2 640 aaPredicted RBP13.42□□□□□ -0.26
HLCS-201ENST00000336648 AP4E1Q9UPM8 1137 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 MAPRE3Q9UPY8 281 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 CROCC2H7BZ55 1655 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 PIK3CDO00329 1044 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 FOXN3O00409 490 aaPredicted RBP13.42□□□□□ -0.26
HLCS-201ENST00000336648 PLA2G6O60733 806 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 ATP6V1B2P21281 511 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 NAA20P61599 178 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 Q4G0T1 1027 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 C11orf96Q7Z7L8 435 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 E2F8A0AVK6 867 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 SERPINE1P05121 402 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 NPY2RP49146 381 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 CDK7P50613 346 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 GRB10Q13322 594 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 DDR2Q16832 855 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 LZTR1Q8N653 840 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 TRAPPC9Q96Q05 1148 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 PACSIN1Q9BY11 444 aa13.42□□□□□ -0.26
HLCS-201ENST00000336648 CDC42EP4Q9H3Q1 356 aaKnown RBP13.42□□□□□ -0.26
HLCS-201ENST00000336648 VPS51Q9UID3 782 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms