RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MYLPFQ96A32 169 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 CSPG4P5Q96PW8 444 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 DUSP16Q9BY84 665 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 TTLL3Q9Y4R7 772 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 NT5C1B-RDH14C9J2C7 533 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 MFSD11O43934 449 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 STAU1O95793 577 aaKnown RBP13.06□□□□□ -0.32
LIMK1-201ENST00000336180 FAM200BP0CF97 657 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 OTUD1Q5VV17 481 aaPredicted RBP13.06□□□□□ -0.32
LIMK1-201ENST00000336180 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 FAM35AQ86V20 835 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 USP29Q9HBJ7 922 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 UBN1Q9NPG3 1134 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 GDAP2Q9NXN4 497 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 DRG1Q9Y295 367 aaKnown RBP13.06□□□□□ -0.32
LIMK1-201ENST00000336180 GMPRP36959 345 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 GPR15P49685 360 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 YWHAZP63104 245 aaKnown RBP13.05□□□□□ -0.32
LIMK1-201ENST00000336180 CDC42EP1Q00587 391 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SP3Q02447 781 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SCN4BQ8IWT1 228 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 PPIL6Q8IXY8 311 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 OR10T2Q8NGX3 314 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 CELF6Q96J87 481 aaKnown RBP13.05□□□□□ -0.32
LIMK1-201ENST00000336180 DDIT4Q9NX09 232 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 CSPG5O95196 566 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SRGAP2BP0DMP2 458 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 DEUP1Q05D60 604 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 RNF34Q969K3 372 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 APOL2Q9BQE5 337 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 DNAJB4Q9UDY4 337 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
LIMK1-201ENST00000336180 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
LIMK1-201ENST00000336180 FAM107AO95990 144 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 FYNP06241 537 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 VAV1P15498 845 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 MRPS5P82675 430 aaKnown RBP13.05□□□□□ -0.32
LIMK1-201ENST00000336180 MORF4L2Q15014 288 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 BOLA3Q53S33 107 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 PPP1R21Q6ZMI0 780 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 RINLQ6ZS11 566 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SLC26A9Q7LBE3 791 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 SH3TC2Q8TF17 1288 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 RTP3Q9BQQ7 232 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 FAM129AQ9BZQ8 928 aa13.05□□□□□ -0.32
LIMK1-201ENST00000336180 H0YHG0 523 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 MOCS2O96007 188 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 ARL4CP56559 192 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 SLC8A3P57103 927 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 BMPR2Q13873 1038 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 TFDP2Q14188 446 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 CASC4Q6P4E1 433 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 MICALL1Q8N3F8 863 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 USP33Q8TEY7 942 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 SEC16BQ96JE7 1060 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 CAPNS2Q96L46 248 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 DTLQ9NZJ0 730 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 TOP3BO95985 862 aaKnown RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 DRD4P21917 467 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 PNPLA4P41247 253 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 OR1G1P47890 313 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 ATN1P54259 1190 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 CAV1Q03135 178 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 STILQ15468 1287 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 XKR4Q5GH76 650 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 CCDC91Q7Z6B0 441 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 BBOF1Q8ND07 529 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 CHMP6Q96FZ7 201 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.04□□□□□ -0.32
LIMK1-201ENST00000336180 SFMBT1Q9UHJ3 866 aa13.04□□□□□ -0.32
LIMK1-201ENST00000336180 XPO1O14980 1071 aaKnown RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 DDHD2O94830 711 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 RPA3P35244 121 aaPredicted RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 MATKP42679 507 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 MBTPS1Q14703 1052 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TAZQ16635 292 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 NCBP2-AS2Q69YL0 99 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 DRICH1Q6PGQ1 229 aaPredicted RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 KDELC2Q7Z4H8 507 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PDIK1LQ8N165 341 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TTC9BQ8N6N2 239 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PPM1NQ8N819 430 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TTC16Q8NEE8 873 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 CABS1Q96KC9 395 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 HNRNPABQ99729 332 aaKnown RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 SLCO1B3Q9NPD5 702 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 ABI2Q9NYB9 513 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms