RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 IFI16Q16666 785 aaKnown RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 CDO1Q16878 200 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 GET4Q7L5D6 327 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 MIB1Q86YT6 1006 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 CENPIQ92674 756 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 FAM204AQ9H8W3 233 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 KCND1Q9NSA2 647 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 DDIT4Q9NX09 232 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 CALCOCO1Q9P1Z2 691 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 LCMT1Q9UIC8 334 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 RASAL2Q9UJF2 1139 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 USP15Q9Y4E8 981 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 GOLGA6L9A6NEM1 432 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 SOBPA7XYQ1 873 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 MSI1O43347 362 aaKnown RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 ENDOD1O94919 500 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 OLFM2O95897 454 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 IGLV3-25P01717 112 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 CKMP06732 381 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 MBL2P11226 248 aaPredicted RBP14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 DESP17661 470 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 GBP1P32455 592 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 NME3Q13232 169 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 POTEHQ6S545 545 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 BNIPLQ7Z465 357 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 NPAS3Q8IXF0 933 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 CMTM8Q8IZV2 173 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 FAM172AQ8WUF8 416 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 SUSD6Q92537 303 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 FGF13Q92913 245 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 ZSWIM3Q96MP5 696 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 NECTIN4Q96NY8 510 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 SERPINB11Q96P15 392 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 POMKQ9H5K3 350 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 ZMYM5Q9UJ78 669 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 UNC80Q8N2C7 3258 aa14.3□□□□□ -0.12
TUBA1B-202ENST00000336023 NOTCH4Q99466 2003 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 GRID2IPA4D2P6 1211 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 GRXCR2A6NFK2 248 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 IRAK2O43187 625 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 F9P00740 461 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 AVPR1AP37288 418 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 HDAC4P56524 1084 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 DEUP1Q05D60 604 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 EIF4EBP2Q13542 120 aaPredicted RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 ACAP1Q15027 740 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 RAB6CQ53S08 254 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 CPNE8Q86YQ8 564 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 ARFGAP1Q8N6T3 406 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 IRX2Q9BZI1 471 aaPredicted RBP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 RAB6CQ9H0N0 254 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 GOLPH3Q9H4A6 298 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 USTQ9Y2C2 406 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 CAPN6Q9Y6Q1 641 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 COL6A3P12111 3177 aa14.29□□□□□ -0.12
TUBA1B-202ENST00000336023 PALMO75781 387 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 RNF8O76064 485 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 MAN1A1P33908 653 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 SLC7A9P82251 487 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 SMAD4Q13485 552 aaKnown RBP14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 TRIP4Q15650 581 aaPredicted RBP14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 DAB2IPQ5VWQ8 1189 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 C11orf63Q6NUN7 778 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 LRRC57Q8N9N7 239 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 KLF16Q9BXK1 252 aaPredicted RBP14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 GKN1Q9NS71 199 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 SMPD4Q9NXE4 827 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 GDE1Q9NZC3 331 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 HBS1LQ9Y450 684 aaKnown RBP14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 HYOU1Q9Y4L1 999 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 CPQQ9Y646 472 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 ALG6Q9Y672 507 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 MYO16Q9Y6X6 1858 aa14.28□□□□□ -0.12
TUBA1B-202ENST00000336023 MBTPS2O43462 519 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 LRCH4O75427 683 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 HMBSP08397 361 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 COMTP21964 271 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 MIPP30301 263 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 SLC1A1P43005 524 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 CXCR3P49682 368 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 KPNA1P52294 538 aaPredicted RBP14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 TBX4P57082 545 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 COG7P83436 770 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 NNTQ13423 1086 aa14.27□□□□□ -0.12
TUBA1B-202ENST00000336023 ZC3H12AQ5D1E8 599 aaKnown RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms