RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 Q3C1V9 767 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 PMF1Q6P1K2 205 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 ZNF534Q76KX8 674 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 FBXO16Q8IX29 292 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-201ENST00000333371 LMNTD2Q8IXW0 634 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 SNRNP25Q9BV90 132 aaKnown RBP12.77□□□□□ -0.37
VPS33B-201ENST00000333371 MIS12Q9H081 205 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 PIDD1Q9HB75 910 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 PCDH18Q9HCL0 1135 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 IL1RAPL1Q9NZN1 696 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 CEP350Q5VT06 3117 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 IGKV6-21A0A0C4DH24 114 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 E2F8A0AVK6 867 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 I3L4J1 428 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 KRT37O76014 449 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 ACADSP16219 412 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 YBX3P16989 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 SLC10A2Q12908 348 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 GRIK3Q13003 919 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 NUDCD3Q8IVD9 361 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 FAM136AQ96C01 138 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 SPATA33Q96N06 139 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 RNPEPQ9H4A4 650 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 PAK5Q9P286 719 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 LRRC37A2A6NM11 1700 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 BPTFQ12830 3046 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 CAPN14A8MX76 684 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 PRR5-ARHGAP8B1AHC4 643 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 USP1O94782 785 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 APOEP02649 317 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 ARHGAP8P85298 464 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 SLC34A1Q06495 639 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 KLC1Q07866 573 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 TFDP2Q14188 446 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 KRT72Q14CN4 511 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 SLC10A6Q3KNW5 377 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 TEX44Q53QW1 395 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 CELF3Q5SZQ8 465 aaKnown RBP12.76□□□□□ -0.37
VPS33B-201ENST00000333371 RNF220Q5VTB9 566 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 STMN2Q93045 179 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 KRT82Q9NSB4 513 aa12.76□□□□□ -0.37
VPS33B-201ENST00000333371 A0A087WZ62 844 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 APOL1O14791 398 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 HNRNPCL1O60812 293 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 GABBR2O75899 941 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 LMNAP02545 664 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 TSHRP16473 764 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 OCRLQ01968 901 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 GOLGA7BQ2TAP0 167 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ZC3H15Q8WU90 426 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 RILPQ96NA2 401 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 FDXACB1Q9BRP7 624 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SYT17Q9BSW7 474 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 CEP41Q9BYV8 373 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SHCBP1LQ9BZQ2 653 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 C2orf40Q9H1Z8 148 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 MROH8Q9H579 483 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SOCS7O14512 581 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PPEF2O14830 753 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ITM2AO43736 263 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 VTNP04004 478 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 MXRA7P84157 204 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ATG14Q6ZNE5 492 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ILDR2Q71H61 639 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ACOT1Q86TX2 421 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SH3TC2Q8TF17 1288 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SIGLEC10Q96LC7 697 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 ANKRD27Q96NW4 1050 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PANX3Q96QZ0 392 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PPP1R12CQ9BZL4 782 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PNPLA8Q9NP80 782 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SMAPO00193 183 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 SORBS2O94875 1100 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 TXNP10599 105 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 VDRP11473 427 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 PRKCHP24723 683 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 AMHR2Q16671 573 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 FAM47CQ5HY64 1035 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 EXOC8Q8IYI6 725 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 FGD4Q96M96 766 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
VPS33B-201ENST00000333371 APOL6Q9BWW8 343 aa12.75□□□□□ -0.37
VPS33B-201ENST00000333371 KLC2Q9H0B6 622 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms