RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 M0QYV0 167 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 OGTO15294 1046 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 PRPSAP2O60256 369 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 GRAP2O75791 330 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 ENDOD1O94919 500 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 HOXC6P09630 235 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 KCNA4P22459 653 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 BCAR1P56945 870 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 GRM1Q13255 1194 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 CYP4V2Q6ZWL3 525 aaPredicted RBP24.42■■□□□ 1.5
TSKU-201ENST00000333090 GSDMBQ8TAX9 411 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 GDPD5Q8WTR4 605 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 NCSTNQ92542 709 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 TWNKQ96RR1 684 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 KLHL4Q9C0H6 718 aa24.42■■□□□ 1.5
TSKU-201ENST00000333090 MSCO60682 206 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 PEX10O60683 326 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 SERPINB6P35237 376 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 ZNF143P52747 638 aaPredicted RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 MAP3K10Q02779 954 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 DLG1Q12959 904 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 MSLNQ13421 630 aaPredicted RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 CCNIQ14094 377 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 ACAP1Q15027 740 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 SCYL2Q6P3W7 929 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 RSPH3Q86UC2 560 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 RTKN2Q8IZC4 609 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 PRPF31Q8WWY3 499 aaKnown RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 MCRS1Q96EZ8 462 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 UBE2OQ9C0C9 1292 aaKnown RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 ZDHHC7Q9NXF8 308 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 PPP1R1BQ9UD71 204 aaPredicted RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 TNNC2P02585 160 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 SRGAP2CP0DJJ0 459 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 UQCRBP14927 111 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 RABGAP1LQ5R372 815 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 DEFB132Q7Z7B7 95 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 FAM159BA6NKW6 160 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 TXNDC9O14530 226 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 SIN3BO75182 1162 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 MICAL2O94851 1124 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 PDGFRAP16234 1089 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 TRIP10Q15642 601 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 EFCAB3Q8N7B9 438 aa24.41■■□□□ 1.5
TSKU-201ENST00000333090 CPSF3Q9UKF6 684 aaKnown RBP24.41■■□□□ 1.5
TSKU-201ENST00000333090 CCNT2O60583 730 aaKnown RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 KLHL2O95198 593 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 GRIA2P42262 883 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 SLC1A6P48664 564 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 TEDDM1Q5T9Z0 273 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 TRNP1Q6NT89 227 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 CDR2LQ86X02 465 aaPredicted RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 UBA3Q8TBC4 463 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 RXFP2Q8WXD0 754 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 SLC4A7Q9Y6M7 1214 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 VCLP18206 1134 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 GPD1P21695 349 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 MMEL1Q495T6 779 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 ZNF667Q5HYK9 610 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 TCHHL1Q5QJ38 904 aaPredicted RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 MBLAC2Q68D91 279 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 ANKRD36BP1Q96IX9 119 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 PIWIL1Q96J94 861 aaKnown RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 SIGLEC10Q96LC7 697 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 EBNA1BP2Q99848 306 aaKnown RBP24.4■■□□□ 1.5
TSKU-201ENST00000333090 CNPY3Q9BT09 278 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 CDH22Q9UJ99 828 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 COMMD3-BMI1R4GMX3 469 aa24.4■■□□□ 1.5
TSKU-201ENST00000333090 LOC100653049A0A140TA62 436 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 APOL1O14791 398 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 KRT34O76011 436 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 GSRP00390 522 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 PTPN11Q06124 597 aaPredicted RBP24.39■■□□□ 1.5
TSKU-201ENST00000333090 PEX6Q13608 980 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 N4BP2L1Q5TBK1 243 aaPredicted RBP24.39■■□□□ 1.5
TSKU-201ENST00000333090 MAP7D3Q8IWC1 876 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 UNC5BQ8IZJ1 945 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 LRRC39Q96DD0 335 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 RTP4Q96DX8 246 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 TEPSINQ96N21 525 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 ACO2Q99798 780 aaKnown RBP24.39■■□□□ 1.5
TSKU-201ENST00000333090 SLC17A6Q9P2U8 582 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 TBC1D30Q9Y2I9 924 aa24.39■■□□□ 1.5
TSKU-201ENST00000333090 A6NJR5 290 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 GRIA1P42261 906 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 SERPINB9P50453 376 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 NME8Q8N427 588 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 HAPLN3Q96S86 360 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 OCEL1Q9H607 264 aa24.39■■□□□ 1.49
TSKU-201ENST00000333090 METTL18O95568 372 aa24.38■■□□□ 1.49
TSKU-201ENST00000333090 PABPC4LP0CB38 370 aaKnown RBP24.38■■□□□ 1.49
TSKU-201ENST00000333090 IL4RP24394 825 aa24.38■■□□□ 1.49
TSKU-201ENST00000333090 PQLC3Q8N755 202 aa24.38■■□□□ 1.49
TSKU-201ENST00000333090 DRAXINQ8NBI3 349 aaPredicted RBP24.38■■□□□ 1.49
TSKU-201ENST00000333090 CAMKK2Q96RR4 588 aa24.38■■□□□ 1.49
TSKU-201ENST00000333090 SIKE1Q9BRV8 207 aa24.38■■□□□ 1.49
TSKU-201ENST00000333090 FGF3P11487 239 aaPredicted RBP24.38■■□□□ 1.49
TSKU-201ENST00000333090 GABRB2P47870 512 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms