RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ADAM33Q9BZ11 813 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 THAP2Q9H0W7 228 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 CD320Q9NPF0 282 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRRC28-202ENST00000331450 CNOT8Q9UFF9 292 aaKnown RBP16.75■□□□□ 0.27
LRRC28-202ENST00000331450 SFMBT1Q9UHJ3 866 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
LRRC28-202ENST00000331450 C2CD4BA6NLJ0 364 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 EIF3CLB5ME19 914 aaKnown RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 IRAK2O43187 625 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 MSI1O43347 362 aaKnown RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 STC2O76061 302 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 NDUFA10O95299 355 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 ASGR2P07307 311 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 KRT3P12035 628 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 ABCB4P21439 1286 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 RFC1P35251 1148 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 CYLC1P35663 651 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 RPL7AP62424 266 aaKnown RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 RING1Q06587 406 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 MAMLD1Q13495 774 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 TRIP4Q15650 581 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 EMC1Q8N766 993 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 BPIFB1Q8TDL5 484 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 SERPINB11Q96P15 392 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 NECAB3Q96P71 396 aaPredicted RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 MCEEQ96PE7 176 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 EIF3CQ99613 913 aaKnown RBP16.74■□□□□ 0.27
LRRC28-202ENST00000331450 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 PARVAQ9NVD7 372 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 RRN3Q9NYV6 651 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 CFAP97Q9P2B7 532 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 KIAA1549LQ6ZVL6 1849 aa16.74■□□□□ 0.27
LRRC28-202ENST00000331450 SLC12A8A0AV02 714 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 DPYSL4O14531 572 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 TRUB2O95900 331 aaKnown RBP16.73■□□□□ 0.27
LRRC28-202ENST00000331450 CYP1A2P05177 515 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 PSMC3P17980 439 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 TFE3P19532 575 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-202ENST00000331450 PTPN9P43378 593 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 RNASE9P60153 205 aaKnown RBP16.73■□□□□ 0.27
LRRC28-202ENST00000331450 COG7P83436 770 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 SLC25A52Q3SY17 297 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 GJD3Q8N144 294 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 SLC44A3Q8N4M1 653 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 ADAM32Q8TC27 787 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 PLD4Q96BZ4 506 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 ARHGEF26Q96DR7 871 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 PGAP3Q96FM1 320 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-202ENST00000331450 SLC39A13Q96H72 371 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 STAP1Q9ULZ2 295 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 TLR6Q9Y2C9 796 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 EPN1Q9Y6I3 576 aaPredicted RBP16.73■□□□□ 0.27
LRRC28-202ENST00000331450 SCINQ9Y6U3 715 aa16.73■□□□□ 0.27
LRRC28-202ENST00000331450 E2F8A0AVK6 867 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 KLKB1P03952 638 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 H2AFZP0C0S5 128 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 TMEM253P0C7T8 217 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 GPC5P78333 572 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 GRM2Q14416 872 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 C10orf76Q5T2E6 689 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 Q6ZNB5 142 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 HTR3DQ70Z44 454 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 H2AFVQ71UI9 128 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 RNF135Q8IUD6 432 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 LRRC8AQ8IWT6 810 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
LRRC28-202ENST00000331450 ASIC4Q96FT7 647 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 FCRL2Q96LA5 508 aaPredicted RBP16.72■□□□□ 0.27
LRRC28-202ENST00000331450 CFAP57Q96MR6 1250 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 TBCBQ99426 244 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 MYO1AQ9UBC5 1043 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 INTUQ9ULD6 942 aa16.72■□□□□ 0.27
LRRC28-202ENST00000331450 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
LRRC28-202ENST00000331450 TMEM191CA6NGB0 347 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 M0QYT0 321 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 ARNTLO00327 626 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 ENDOD1O94919 500 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 IRF1P10914 325 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 PDGFRAP16234 1089 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 GPD1P21695 349 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 SULT1E1P49888 294 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 KPNA1P52294 538 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-202ENST00000331450 TBX4P57082 545 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 CCZ1BP86790 482 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 CCZ1P86791 482 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-202ENST00000331450 OGDHQ02218 1023 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 ZNF252P-AS1Q0IIN9 211 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 TDGQ13569 410 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 CCDC14Q49A88 953 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 CCDC112Q8NEF3 446 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 FNIP1Q8TF40 1166 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
LRRC28-202ENST00000331450 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 TRIM7Q9C029 511 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
LRRC28-202ENST00000331450 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms