RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 ZNF12P17014 697 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 STAT2P52630 851 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 CDKL1Q00532 357 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 TGFBIQ15582 683 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 RWDD4Q6NW29 188 aaKnown RBP25.12■■□□□ 1.61
SOX1-201ENST00000330949 ELMSAN1Q6PJG2 1045 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 NDUFAF2Q8N183 169 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 ZNF778Q96MU6 729 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 UNC45AQ9H3U1 944 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 HOMER2Q9NSB8 354 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 SELENONQ9NZV5 590 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 COQ6Q9Y2Z9 468 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 POMGNT1Q8WZA1 660 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 RTKNQ9BST9 563 aa25.12■■□□□ 1.61
SOX1-201ENST00000330949 PRPF19Q9UMS4 504 aaKnown RBP25.12■■□□□ 1.61
SOX1-201ENST00000330949 GREB1LQ9C091 1923 aaPredicted RBP25.11■■□□□ 1.61
SOX1-201ENST00000330949 FUOMA2VDF0 154 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 F8VP50 259 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 COL6A2P12110 1019 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 WDR78Q5VTH9 848 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 LZTR1Q8N653 840 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 NYAP2Q9P242 653 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 SCAF8Q9UPN6 1271 aaKnown RBP25.11■■□□□ 1.61
SOX1-201ENST00000330949 UBR3Q6ZT12 1888 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 COX4I1P13073 169 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 PDK1Q15118 436 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 TXNRD3NBQ6F5E7 133 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 GALNT4Q8N4A0 578 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 PPP4R1Q8TF05 950 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 CFAP36Q96G28 342 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 COPS7BQ9H9Q2 264 aaPredicted RBP25.11■■□□□ 1.61
SOX1-201ENST00000330949 CNOT11Q9UKZ1 510 aaKnown RBP25.11■■□□□ 1.61
SOX1-201ENST00000330949 PRR12Q9ULL5 1215 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 TTLL3Q9Y4R7 772 aa25.11■■□□□ 1.61
SOX1-201ENST00000330949 C1QAP02745 245 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 NCF2P19878 526 aaPredicted RBP25.1■■□□□ 1.61
SOX1-201ENST00000330949 SLC1A6P48664 564 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 IDH3AP50213 366 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 MRPS22P82650 360 aaKnown RBP25.1■■□□□ 1.61
SOX1-201ENST00000330949 ZNF423Q2M1K9 1284 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 FASTKD1Q53R41 847 aaKnown RBP25.1■■□□□ 1.61
SOX1-201ENST00000330949 ACER1Q8TDN7 264 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 BORCS5Q969J3 196 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 TMIGD2Q96BF3 282 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 MFSD14AQ96MC6 490 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 TSPYL2Q9H2G4 693 aaPredicted RBP25.1■■□□□ 1.61
SOX1-201ENST00000330949 THSD7AQ9UPZ6 1657 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 CFHP08603 1231 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 ZNF252P-AS1Q0IIN9 211 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 DPYSL3Q14195 570 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 FLOT2Q14254 428 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 PSMD6Q15008 389 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 FSCBQ5H9T9 825 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 RANBP9Q96S59 729 aa25.1■■□□□ 1.61
SOX1-201ENST00000330949 CLRN2A0PK11 232 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TCP10L2B9ZVM9 353 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TRDMT1O14717 391 aaKnown RBP25.09■■□□□ 1.61
SOX1-201ENST00000330949 CST8O60676 142 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 H6PDO95479 791 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 HMOX2P30519 316 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TUBA4AP68366 448 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TEDDM1Q5T9Z0 273 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 VPS45Q9NRW7 570 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 SLC16A4O15374 487 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TBC1D12O60347 775 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 LYPLA1O75608 230 aaPredicted RBP25.09■■□□□ 1.61
SOX1-201ENST00000330949 CAPNS1P04632 268 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 OCM2P0CE71 109 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 OCMP0CE72 109 aaPredicted RBP25.09■■□□□ 1.61
SOX1-201ENST00000330949 GNA15P30679 374 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 PEX6Q13608 980 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 BMPR2Q13873 1038 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 PIGHQ14442 188 aaPredicted RBP25.09■■□□□ 1.61
SOX1-201ENST00000330949 WDR44Q5JSH3 913 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 UNC45BQ8IWX7 931 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 DEPTORQ8TB45 409 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 ZNF577Q9BSK1 485 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 TEKT3Q9BXF9 490 aa25.09■■□□□ 1.61
SOX1-201ENST00000330949 MBLAC2Q68D91 279 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 DCUN1D2Q6PH85 259 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 TMEM179Q6ZVK1 233 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 BBS12Q6ZW61 710 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 RSPH3Q86UC2 560 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 CHERPQ8IWX8 916 aaKnown RBP25.08■■□□□ 1.61
SOX1-201ENST00000330949 FAM71DQ8N9W8 422 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 PRKCHP24723 683 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 CYP24A1Q07973 514 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 BRDTQ58F21 947 aaPredicted RBP25.08■■□□□ 1.61
SOX1-201ENST00000330949 DLG3Q92796 817 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 ZDHHC15Q96MV8 337 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 MCEEQ96PE7 176 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 CLEC11AQ9Y240 323 aa25.08■■□□□ 1.61
SOX1-201ENST00000330949 CXorf49A8MYA2 514 aaPredicted RBP25.08■■□□□ 1.6
SOX1-201ENST00000330949 XPO1O14980 1071 aaKnown RBP25.08■■□□□ 1.6
SOX1-201ENST00000330949 BCAP31P51572 246 aa25.08■■□□□ 1.6
SOX1-201ENST00000330949 KBTBD7Q8WVZ9 684 aa25.08■■□□□ 1.6
SOX1-201ENST00000330949 DOLKQ9UPQ8 538 aa25.08■■□□□ 1.6
SOX1-201ENST00000330949 MYRFQ9Y2G1 1151 aa25.08■■□□□ 1.6
SOX1-201ENST00000330949 TXNL4AP83876 142 aaKnown RBP25.07■■□□□ 1.6
SOX1-201ENST00000330949 ZNF829Q3KNS6 432 aaPredicted RBP25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms