RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 NCAM1P13591 858 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 MIPP30301 263 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 RDXP35241 583 aaKnown RBP18.79■□□□□ 0.6
SYNE4-201ENST00000324444 SULT1E1P49888 294 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 ATP11AP98196 1134 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 MTA1Q13330 715 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 TAF12Q16514 161 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 ITIH5Q86UX2 942 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 VSIG1Q86XK7 387 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 ALG3Q92685 438 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 NPY6RQ99463 290 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 HOMER3Q9NSC5 361 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 UXTQ9UBK9 157 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-201ENST00000324444 EFR3BQ9Y2G0 817 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 SLC27A5Q9Y2P5 690 aa18.79■□□□□ 0.6
SYNE4-201ENST00000324444 USP15Q9Y4E8 981 aaPredicted RBP18.79■□□□□ 0.6
SYNE4-201ENST00000324444 GREB1Q4ZG55 1949 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-201ENST00000324444 MDM4O15151 490 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 ZNF185O15231 689 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 CNPP09543 421 aaKnown RBP18.78■□□□□ 0.6
SYNE4-201ENST00000324444 COL9A1P20849 921 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 PTPN7P35236 360 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 EPHB3P54753 998 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 TAS2R40P59535 323 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 SLC25A11Q02978 314 aaKnown RBP18.78■□□□□ 0.6
SYNE4-201ENST00000324444 DEUP1Q05D60 604 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 KCNC3Q14003 757 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 PDK2Q15119 407 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 CDO1Q16878 200 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 LONRF2Q1L5Z9 754 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 ARL13BQ3SXY8 428 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 CCDC50Q8IVM0 306 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 FBXO32Q969P5 355 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 TTLL2Q9BWV7 592 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 CRISPLD1Q9H336 500 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 PRDM16Q9HAZ2 1276 aa18.78■□□□□ 0.6
SYNE4-201ENST00000324444 MTCL1Q9Y4B5 1905 aaKnown RBP18.78■□□□□ 0.6
SYNE4-201ENST00000324444 SLC38A8A6NNN8 435 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 KRT1P04264 644 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 PYGMP11217 842 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 ZNF135P52742 658 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-201ENST00000324444 C15orf59Q2T9L4 293 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-201ENST00000324444 SCYL2Q6P3W7 929 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 TMEM184AQ6ZMB5 413 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 ZNF276Q8N554 614 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 TTC9BQ8N6N2 239 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 KCTD6Q8NC69 237 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 CMASQ8NFW8 434 aaPredicted RBP18.77■□□□□ 0.6
SYNE4-201ENST00000324444 SCAMP5Q8TAC9 235 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 UBXN4Q92575 508 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 CASP10Q92851 521 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 RUNDC3BQ96NL0 473 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 KLHL5Q96PQ7 755 aa18.77■□□□□ 0.6
SYNE4-201ENST00000324444 FAM86C2PA6NEL3 165 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 ZNF487B1APH4 448 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 M0QYT0 321 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 TJP3O95049 919 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 FGGP02679 453 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 KLRC2P26717 231 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 CDR1P51861 262 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 IFRD2Q12894 506 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-201ENST00000324444 TMEM31Q5JXX7 168 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 ERMARDQ5T6L9 678 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 ACBD5Q5T8D3 534 aaPredicted RBP18.76■□□□□ 0.59
SYNE4-201ENST00000324444 TRNP1Q6NT89 227 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 ANKRD54Q6NXT1 300 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 BHLHA9Q7RTU4 235 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 BNIPLQ7Z465 357 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 STKLD1Q8NE28 680 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 SPATA4Q8NEY3 305 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 TRMT2BQ96GJ1 504 aaKnown RBP18.76■□□□□ 0.59
SYNE4-201ENST00000324444 SERPINB11Q96P15 392 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 APOL5Q9BWW9 433 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 FAM204AQ9H8W3 233 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 ZWILCHQ9H900 591 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 YIPF1Q9Y548 306 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 HCFC2Q9Y5Z7 792 aa18.76■□□□□ 0.59
SYNE4-201ENST00000324444 KRIT1O00522 736 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 CLASP2O75122 1294 aaKnown RBP18.75■□□□□ 0.59
SYNE4-201ENST00000324444 TUBBP07437 444 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 SLC2A3P11169 496 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 ALADP13716 330 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 GJC1P36383 396 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 MARCKSL1P49006 195 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 KPNA1P52294 538 aaPredicted RBP18.75■□□□□ 0.59
SYNE4-201ENST00000324444 HDAC4P56524 1084 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 PABPC1LQ4VXU2 614 aaKnown RBP18.75■□□□□ 0.59
SYNE4-201ENST00000324444 TFDP3Q5H9I0 405 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 DCAF12L1Q5VU92 463 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 LILRA6Q6PI73 481 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 SYCE2Q6PIF2 218 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 RSRC2Q7L4I2 434 aaKnown RBP18.75■□□□□ 0.59
SYNE4-201ENST00000324444 SLC13A5Q86YT5 568 aaPredicted RBP18.75■□□□□ 0.59
SYNE4-201ENST00000324444 ELMOD1Q8N336 334 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 ARFGAP1Q8N6T3 406 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 SLC7A14Q8TBB6 771 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 HDAC7Q8WUI4 952 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 NTAN1Q96AB6 310 aa18.75■□□□□ 0.59
SYNE4-201ENST00000324444 MYRFLQ96LU7 910 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms