RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 SLC4A5Q9BY07 1137 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 BCLAF3A2AJT9 711 aaKnown RBP18.03■□□□□ 0.48
COL9A1-201ENST00000320755 ESRRAP11474 423 aaPredicted RBP18.03■□□□□ 0.48
COL9A1-201ENST00000320755 CALB2P22676 271 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 SESN2P58004 480 aaPredicted RBP18.03■□□□□ 0.48
COL9A1-201ENST00000320755 LGSNQ5TDP6 509 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 TMEM110Q86TL2 294 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 NUDCD3Q8IVD9 361 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 DEPDC1BQ8WUY9 529 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 MCUR1Q96AQ8 359 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 NXF3Q9H4D5 531 aaKnown RBP18.03■□□□□ 0.48
COL9A1-201ENST00000320755 IL1RAPL1Q9NZN1 696 aa18.03■□□□□ 0.48
COL9A1-201ENST00000320755 E2F8A0AVK6 867 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 GOT1P17174 413 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 MRPS5P82675 430 aaKnown RBP18.02■□□□□ 0.48
COL9A1-201ENST00000320755 CDK16Q00536 496 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 STK32AQ8WU08 396 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 NSL1Q96IY1 281 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 NMUR2Q9GZQ4 415 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 ZNF408Q9H9D4 720 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 GOLGA2P5Q9HBQ8 144 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 RNF181Q9P0P0 153 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 PLLPQ9Y342 182 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 FCHO1O14526 889 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 RFPL1O75677 317 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 C1QAP02745 245 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 RCN2Q14257 317 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 MARCH8Q5T0T0 291 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 HEATR6Q6AI08 1181 aaKnown RBP18.02■□□□□ 0.48
COL9A1-201ENST00000320755 FASTKD5Q7L8L6 764 aaKnown RBP18.02■□□□□ 0.48
COL9A1-201ENST00000320755 LINC01465Q8N7H1 131 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 FAXDC2Q96IV6 333 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 SAR1AQ9NR31 198 aa18.02■□□□□ 0.48
COL9A1-201ENST00000320755 PPARGC1AQ9UBK2 798 aaKnown RBP18.02■□□□□ 0.48
COL9A1-201ENST00000320755 MTO1Q9Y2Z2 717 aaKnown RBP18.02■□□□□ 0.48
COL9A1-201ENST00000320755 CCDC22O60826 627 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 SKAP2O75563 359 aaPredicted RBP18.02■□□□□ 0.47
COL9A1-201ENST00000320755 POU5F1BQ06416 359 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 KHDC1Q4VXA5 237 aaKnown RBP18.02■□□□□ 0.47
COL9A1-201ENST00000320755 PKDCCQ504Y2 493 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 C16orf46Q6P387 395 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 MAMDC4Q6UXC1 1216 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 RINLQ6ZS11 566 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 CHSY1Q86X52 802 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 CDKL3Q8IVW4 592 aaPredicted RBP18.02■□□□□ 0.47
COL9A1-201ENST00000320755 PPTC7Q8NI37 304 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 ZNF398Q8TD17 642 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 E2F7Q96AV8 911 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 OXNAD1Q96HP4 312 aaPredicted RBP18.02■□□□□ 0.47
COL9A1-201ENST00000320755 SIGLEC10Q96LC7 697 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 KCTD15Q96SI1 283 aaPredicted RBP18.02■□□□□ 0.47
COL9A1-201ENST00000320755 SLC5A4Q9NY91 659 aa18.02■□□□□ 0.47
COL9A1-201ENST00000320755 LOC285556D6RIA3 1793 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 WDR27A2RRH5 827 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 KRT38O76015 456 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 TPBGLP0DKB5 382 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 HOXA11P31270 313 aaPredicted RBP18.01■□□□□ 0.47
COL9A1-201ENST00000320755 GRM5P41594 1212 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 PPIL2Q13356 520 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 STILQ15468 1287 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CES4AQ5XG92 561 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 TEKT4Q8WW24 435 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CSPG4P5Q96PW8 444 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 TBCBQ99426 244 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 ZNF670Q9BS34 389 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 BTBD10Q9BSF8 475 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.01■□□□□ 0.47
COL9A1-201ENST00000320755 GJD2Q9UKL4 321 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 MAGED2Q9UNF1 606 aaPredicted RBP18.01■□□□□ 0.47
COL9A1-201ENST00000320755 KCNH4Q9UQ05 1017 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CES3Q6UWW8 571 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 RPAINQ86UA6 219 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CCNYQ8ND76 341 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 SLC2A14Q8TDB8 520 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 EBNA1BP2Q99848 306 aaKnown RBP18.01■□□□□ 0.47
COL9A1-201ENST00000320755 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL9A1-201ENST00000320755 CNTN3Q9P232 1028 aa18.01■□□□□ 0.47
COL9A1-201ENST00000320755 ENO1P06733 434 aaKnown RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 GNL1P36915 607 aaPredicted RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 RABGGTBP53611 331 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 AP1B1Q10567 949 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 ZNF534Q76KX8 674 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 DPP9Q86TI2 863 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 IFNLR1Q8IU57 520 aaPredicted RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 PDCD7Q8N8D1 485 aaKnown RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 PPP1R14CQ8TAE6 165 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 DTX3LQ8TDB6 740 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 DTLQ9NZJ0 730 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 MDM4O15151 490 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 GSC2O15499 205 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 RECQL4O94761 1208 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 GJA5P36382 358 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 PITX1P78337 314 aaPredicted RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 CCDC6Q16204 474 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 KYAT1Q16773 422 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 BZW1Q7L1Q6 419 aaKnown RBP18■□□□□ 0.47
COL9A1-201ENST00000320755 GPRC5AQ8NFJ5 357 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 BEST2Q8NFU1 509 aa18■□□□□ 0.47
COL9A1-201ENST00000320755 GSDMBQ8TAX9 411 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms