RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 SLC6A3Q01959 620 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 GOLGA8FQ08AF8 430 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 GOLGA8DPQ0D2H9 430 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 LY6G5CQ5SRR4 150 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 PHLDB2Q86SQ0 1253 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 XYLT1Q86Y38 959 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 DEFB106AQ8N104 65 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 IPO4Q8TEX9 1081 aaKnown RBP17.33■□□□□ 0.37
LRRC42-201ENST00000319223 NUP58Q9BVL2 599 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 EDEM3Q9BZQ6 932 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 POPDC2Q9HBU9 364 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 RAPGEFL1Q9UHV5 662 aa17.33■□□□□ 0.37
LRRC42-201ENST00000319223 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.37
LRRC42-201ENST00000319223 AGO1Q9UL18 857 aaKnown RBP17.33■□□□□ 0.37
LRRC42-201ENST00000319223 GYPCP04921 128 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 GALK1P51570 392 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 ASIC2Q16515 512 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 EFHC1Q5JVL4 640 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 SFMBT2Q5VUG0 894 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 BEND5Q7L4P6 421 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 TAC4Q86UU9 113 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 DENND1CQ8IV53 801 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 SLC2A13Q96QE2 648 aa17.33■□□□□ 0.36
LRRC42-201ENST00000319223 SEPT11Q9NVA2 429 aaKnown RBP17.33■□□□□ 0.36
LRRC42-201ENST00000319223 A0A1W2PQJ5 194 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 CAPN9O14815 690 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 CHRNB1P11230 501 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 SKILP12757 684 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 OPRD1P41143 372 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 SLC6A11P48066 632 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 MESP2Q0VG99 397 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 PTP4A2Q12974 167 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 CLEC16AQ2KHT3 1053 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 DCAF6Q58WW2 860 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 C12orf40Q86WS4 652 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 OTUB2Q96DC9 234 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 HAUS4Q9H6D7 363 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 RBM12Q9NTZ6 932 aaKnown RBP17.32■□□□□ 0.36
LRRC42-201ENST00000319223 ASNSD1Q9NWL6 643 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 CAPN11Q9UMQ6 739 aa17.32■□□□□ 0.36
LRRC42-201ENST00000319223 HBS1LQ9Y450 684 aaKnown RBP17.32■□□□□ 0.36
LRRC42-201ENST00000319223 HSF2BPO75031 334 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 IGLV3-27P01718 113 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 GLI1P08151 1106 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 MMP8P22894 467 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
LRRC42-201ENST00000319223 NR1H3Q13133 447 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 FSTL4Q6MZW2 842 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 TRNP1Q6NT89 227 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 TRIM72Q6ZMU5 477 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 TPGS1Q6ZTW0 290 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 ZNF571Q7Z3V5 609 aaPredicted RBP17.31■□□□□ 0.36
LRRC42-201ENST00000319223 EZH1Q92800 747 aaPredicted RBP17.31■□□□□ 0.36
LRRC42-201ENST00000319223 PLD4Q96BZ4 506 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 MSANTD3Q96H12 275 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 NELL2Q99435 816 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 C11orf70Q9BRQ4 267 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 ADAM33Q9BZ11 813 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 LMAN1LQ9HAT1 526 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 TAS2R14Q9NYV8 317 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 MRPS17Q9Y2R5 130 aaKnown RBP17.31■□□□□ 0.36
LRRC42-201ENST00000319223 ZNF318Q5VUA4 2279 aa17.31■□□□□ 0.36
LRRC42-201ENST00000319223 ITIH6Q6UXX5 1313 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 ANTXRLA6NF34 631 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 GOLGA8SH3BPF8 625 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TRDMT1O14717 391 aaKnown RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CBFA2T2O43439 604 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 IGLV3-25P01717 112 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CCDC172P0C7W6 258 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 ADH5P11766 374 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 PRKCIP41743 596 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TBX4P57082 545 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 SNX16P57768 344 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CENPCQ03188 943 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TOGARAM2Q6ZUX3 1019 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 DNAAF5Q86Y56 855 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 ZDHHC17Q8IUH5 632 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 ZNF397Q8NF99 534 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CLDN23Q96B33 292 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 OSBPL6Q9BZF3 934 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CALCOCO1Q9P1Z2 691 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 DAB1O75553 588 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 GJB6O95452 261 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TRUB2O95900 331 aaKnown RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TFE3P19532 575 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TNFAIP3P21580 790 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 CASP14P31944 242 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 EIF4EBP2Q13542 120 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 ANO4Q32M45 955 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 TMEM196Q5HYL7 178 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 FAM102AQ5T9C2 384 aaPredicted RBP17.3■□□□□ 0.36
LRRC42-201ENST00000319223 HGSNATQ68CP4 663 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 SFTPA1Q8IWL2 248 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 NAT16Q8N8M0 369 aa17.3■□□□□ 0.36
LRRC42-201ENST00000319223 BHMTQ93088 406 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms