RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 GLRBP48167 497 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 CDH15P55291 814 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 CDKL1Q00532 357 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 FOLH1Q04609 750 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 C1QBPQ07021 282 aaKnown RBP9.96□□□□□ -0.82
RPGR-201ENST00000318842 PSMD6Q15008 389 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 SLC9B1Q4ZJI4 515 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 EFHC1Q5JVL4 640 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 PDSS2Q86YH6 399 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 CRLF3Q8IUI8 442 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 PLD6Q8N2A8 252 aaKnown RBP9.96□□□□□ -0.82
RPGR-201ENST00000318842 DEPDC1BQ8WUY9 529 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 PRPF31Q8WWY3 499 aaKnown RBP9.96□□□□□ -0.82
RPGR-201ENST00000318842 RPL10LQ96L21 214 aaKnown RBP9.96□□□□□ -0.82
RPGR-201ENST00000318842 OR52B2Q96RD2 323 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 DHX35Q9H5Z1 703 aaKnown RBP9.96□□□□□ -0.82
RPGR-201ENST00000318842 SENP1Q9P0U3 644 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 ANGPTL2Q9UKU9 493 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 EMCNQ9ULC0 261 aa9.96□□□□□ -0.82
RPGR-201ENST00000318842 SLX4Q8IY92 1834 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 VCANP13611 3396 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 C10orf71Q711Q0 1435 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 CHRNGP07510 517 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 POTEJP0CG39 1038 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 CXCL8P10145 99 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 LMNB2Q03252 620 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 MED21Q13503 144 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 NADK2Q4G0N4 442 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 EEF1DP3Q658K8 133 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 NAPRTQ6XQN6 538 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 ANKRD23Q86SG2 305 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 SCUBE3Q8IX30 993 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.95□□□□□ -0.82
RPGR-201ENST00000318842 STKLD1Q8NE28 680 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 FAM81AQ8TBF8 368 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 HSPBAP1Q96EW2 488 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 NLRP4Q96MN2 994 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TRIM8Q9BZR9 551 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TMX4Q9H1E5 349 aaPredicted RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 TMOD2Q9NZR1 351 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 POMPQ9Y244 141 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 MKI67P46013 3256 aaKnown RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 TMEM233B4DJY2 109 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 C9JVG2 144 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 H3BSA7 217 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TBC1D12O60347 775 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 GSRP00390 522 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 PTPN1P18031 435 aaKnown RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 EPHA3P29320 983 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 MAGEA10P43363 369 aaPredicted RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 TBL3Q12788 808 aaKnown RBP9.95□□□□□ -0.82
RPGR-201ENST00000318842 MYBPC2Q14324 1141 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 SPDYAQ5MJ70 313 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 STRIP1Q5VSL9 837 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 OR6B2Q6IFH4 312 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 SLC26A11Q86WA9 606 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TMEM35BQ8NCS4 154 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 RIN3Q8TB24 985 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 FAM172AQ8WUF8 416 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 LGMNQ99538 433 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 ANLNQ9NQW6 1124 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 RNF146Q9NTX7 359 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 TMEM216Q9P0N5 145 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 ARHGAP28Q9P2N2 729 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 CDH22Q9UJ99 828 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 CNTNAP1P78357 1384 aa9.95□□□□□ -0.82
RPGR-201ENST00000318842 SLC15A5A6NIM6 579 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 ALDOAP04075 364 aaKnown RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 ITGAXP20702 1163 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 PTGER2P43116 358 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 TRPC3Q13507 836 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 TUBB3Q13509 450 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 CAPSQ13938 189 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 ZNF699Q32M78 642 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 SNRNP48Q6IEG0 339 aaKnown RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 PODNQ7Z5L7 613 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 CTU1Q7Z7A3 348 aaKnown RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 ZNF781Q8N8C0 355 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 DRAXINQ8NBI3 349 aaPredicted RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 OPTNQ96CV9 577 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 TRIM11Q96F44 468 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 HIC2Q96JB3 615 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 RPAP3Q9H6T3 665 aaPredicted RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 EHMT1Q9H9B1 1298 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 STK24Q9Y6E0 443 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 NOP56O00567 594 aaKnown RBP9.94□□□□□ -0.82
RPGR-201ENST00000318842 VILLO15195 856 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 SLC26A4O43511 780 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 NFICP08651 508 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 SMIM18P0DKX4 95 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 CYP3A5P20815 502 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 AVPR1AP37288 418 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 NUDT2P50583 147 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 IGBP1P78318 339 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 SLC18A2Q05940 514 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 KRT81Q14533 505 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 KCNJ11Q14654 390 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 MYBPC3Q14896 1274 aa9.94□□□□□ -0.82
RPGR-201ENST00000318842 MYLK3Q32MK0 819 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms