RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 KLC3Q6P597 504 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TSHZ1Q6ZSZ6 1077 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 MAVSQ7Z434 540 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 WDTC1Q8N5D0 677 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF513Q8N8E2 541 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ZDHHC15Q96MV8 337 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TARS2Q9BW92 718 aaKnown RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 IMPG2Q9BZV3 1241 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 HAPLN2Q9GZV7 340 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 PIM2Q9P1W9 311 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 GOLGA8QA0A0J9YX86 632 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 HMX2A2RU54 273 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 GOLGA8OA6NCC3 632 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 LRRIQ4A6NIV6 560 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 GOLGA8NF8WBI6 632 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 NDC80O14777 642 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 XPO1O14980 1071 aaKnown RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 EXTL3O43909 919 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TBC1D12O60347 775 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 KRT38O76015 456 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 OSBPP22059 807 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 SLC5A2P31639 672 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 SERPINB5P36952 375 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 GRIA1P42261 906 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 PKNOX1P55347 436 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 PSMC1P62191 440 aaKnown RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 WASHC5Q12768 1159 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 SNAPC2Q13487 334 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TUBB3Q13509 450 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 DGKZQ13574 1117 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 HADHQ16836 314 aaKnown RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 MTERF2Q49AM1 385 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 PTPN20Q4JDL3 420 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TMEM259Q4ZIN3 620 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 N4BP2L1Q5TBK1 243 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ADGRG6Q86SQ4 1221 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ADAM32Q8TC27 787 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 DEPDC1BQ8WUY9 529 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 USP13Q92995 863 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 MOCOSQ96EN8 888 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ATXN7L3BQ96GX2 97 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 LRGUKQ96M69 825 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 CATSPER2Q96P56 530 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TAAR1Q96RJ0 339 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 OXCT2Q9BYC2 517 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 POLR3FQ9H1D9 316 aaPredicted RBP9.98□□□□□ -0.81
PTPRA-202ENST00000318266 RNPEPQ9H4A4 650 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 TBC1D22BQ9NU19 505 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 GPATCH2LQ9NWQ4 482 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF510Q9Y2H8 683 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 NR2E3Q9Y5X4 410 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 PCNTO95613 3336 aa9.98□□□□□ -0.81
PTPRA-202ENST00000318266 BOLA2-SMG1P6H3BVE0 249 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 GRAP2O75791 330 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 FUT4P22083 530 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 CDH6P55285 790 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 SH3BGRP55822 239 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MYBPC1Q00872 1141 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 KRT81Q14533 505 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 TBCCQ15814 346 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 DENND1BQ6P3S1 775 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 LRRC8BQ6P9F7 803 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 UNC5AQ6ZN44 842 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 PTAR1Q7Z6K3 402 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-202ENST00000318266 C4orf19Q8IY42 314 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 PQLC1Q8N2U9 271 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 TMEM130Q8N3G9 435 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 RAB3IL1Q8TBN0 382 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MIPOL1Q8TD10 442 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.97□□□□□ -0.81
PTPRA-202ENST00000318266 CHURC1Q8WUH1 139 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 TMEM174Q8WUU8 243 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 PLAC1Q9HBJ0 212 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 POPDC2Q9HBU9 364 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.97□□□□□ -0.81
PTPRA-202ENST00000318266 SCAF8Q9UPN6 1271 aaKnown RBP9.97□□□□□ -0.81
PTPRA-202ENST00000318266 NEMP1O14524 444 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 RGL2O15211 777 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 IL1BP01584 269 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 KRT7P08729 469 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 ADORA2AP29274 412 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MIPP30301 263 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 IDH3AP50213 366 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 NUDT2P50583 147 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MYL6P60660 151 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 KCNJ11Q14654 390 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 PSMD6Q15008 389 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 TEDDM1Q5T9Z0 273 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 SWSAP1Q6NVH7 229 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 ZBTB33Q86T24 672 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 FBXW8Q8N3Y1 598 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 ACTRT2Q8TDY3 377 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 GAB3Q8WWW8 586 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MASTLQ96GX5 879 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 MSTO1Q9BUK6 570 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 ZNF358Q9NW07 568 aa9.97□□□□□ -0.81
PTPRA-202ENST00000318266 NXF1Q9UBU9 619 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms