RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 CDHR3Q6ZTQ4 885 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 CCDC185Q8N715 623 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 RFWD2Q8NHY2 731 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 BRI3BPQ8WY22 251 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 NT5C3BQ969T7 300 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 THOC1Q96FV9 657 aaKnown RBP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 PRDM16Q9HAZ2 1276 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 ZC3H7BQ9UGR2 993 aaKnown RBP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 HMX2A2RU54 273 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SMIM10L2AP0DMW4 78 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SMIM10L2BP0DMW5 78 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 PYGBP11216 843 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 ACADSBP45954 432 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 STEAP4Q687X5 459 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 LRRC6Q86X45 466 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 PSTKQ8IV42 348 aaKnown RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 OR6B3Q8NGW1 331 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SKA1Q96BD8 255 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SLC10A4Q96EP9 437 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 RAB3IPQ96QF0 476 aaPredicted RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 MAGEB5Q9BZ81 275 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SF3B1O75533 1304 aaKnown RBP eCLIP14.28□□□□□ -0.122e-7■■■■■ 143.6
ATG4C-201ENST00000317868 A8MXQ7 604 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 CD4P01730 458 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 DESP17661 470 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 CCND1P24385 295 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 LMO2P25791 158 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 TARSP26639 723 aaKnown RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 GLRA4Q5JXX5 417 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 FAXCQ5TGI0 409 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 FAM91A1Q658Y4 838 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 CLNKQ7Z7G1 428 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 OXNAD1Q96HP4 312 aaPredicted RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 OSMRQ99650 979 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 EBNA1BP2Q99848 306 aaKnown RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 NPHS2Q9NP85 383 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 DTLQ9NZJ0 730 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 SMIM28A0A1B0GU29 152 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 KPNA7A9QM74 516 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 DLDP09622 509 aaKnown RBP14.28□□□□□ -0.12
ATG4C-201ENST00000317868 VAV1P15498 845 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 GTF2A2P52657 109 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 ZNF560Q96MR9 790 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 FAM111AQ96PZ2 611 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 TSSK1BQ9BXA7 367 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 MOCS1Q9NZB8 636 aa14.28□□□□□ -0.12
ATG4C-201ENST00000317868 NLRC5Q86WI3 1866 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 HACD1B0YJ81 288 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 HAS3O00219 553 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 XPO1O14980 1071 aaKnown RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 ALDH1A2O94788 518 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 MAP3K6O95382 1288 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 APRTP07741 180 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 SNRPAP09012 282 aaKnown RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 CSH1P0DML2 217 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 CSH2P0DML3 217 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 TROVE2P10155 538 aaKnown RBP eCLIP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 TKTP29401 623 aaKnown RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 PNPLA4P41247 253 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 CCNG1P51959 295 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 SOX4Q06945 474 aaPredicted RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 TMEM62Q0P6H9 643 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 PPP6R3Q5H9R7 873 aaPredicted RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 ZNF618Q5T7W0 954 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 VPS52Q8N1B4 723 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 GSDMBQ8TAX9 411 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 MTBPQ96DY7 904 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 SRPK1Q96SB4 655 aaKnown RBP14.27□□□□□ -0.12
ATG4C-201ENST00000317868 HAO1Q9UJM8 370 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 PLLPQ9Y342 182 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 PCDHA11Q9Y5I1 949 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 IKBKGQ9Y6K9 419 aa14.27□□□□□ -0.12
ATG4C-201ENST00000317868 TRIM49D1C9J1S8 452 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 HNRNPCL1O60812 293 aaKnown RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 WARSP23381 471 aaKnown RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 MATKP42679 507 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 SERPINB4P48594 390 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 TAF1BQ53T94 588 aaPredicted RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 KCNT2Q6UVM3 1135 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 TIFABQ6ZNK6 161 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 MPP5Q8N3R9 675 aa14.27□□□□□ -0.13
ATG4C-201ENST00000317868 DHX35Q9H5Z1 703 aaKnown RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 XAB2Q9HCS7 855 aaKnown RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 EIF2B3Q9NR50 452 aaKnown RBP14.27□□□□□ -0.13
ATG4C-201ENST00000317868 CCL15-CCL14A0A0B4J2E2 113 aa14.26□□□□□ -0.13
ATG4C-201ENST00000317868 DAB1O75553 588 aa14.26□□□□□ -0.13
ATG4C-201ENST00000317868 MLNP12872 115 aa14.26□□□□□ -0.13
ATG4C-201ENST00000317868 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
ATG4C-201ENST00000317868 CCL15Q16663 113 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms