RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PAQR9Q6ZVX9 377 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 RCOR2Q8IZ40 523 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 SLC43A3Q8NBI5 491 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 DNAJC9Q8WXX5 260 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 SLCO2A1Q92959 643 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 ADAM2Q99965 735 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 TMEM109Q9BVC6 243 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 ZCWPW1Q9H0M4 648 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 INTS9Q9NV88 658 aaKnown RBP13.57□□□□□ -0.24
CPNE1-201ENST00000317677 DLGAP2Q9P1A6 1054 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 NKX1-2Q9UD57 310 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-201ENST00000317677 ARL2BPQ9Y2Y0 163 aa13.57□□□□□ -0.24
CPNE1-201ENST00000317677 hCG_1818297A0A087WSY0 165 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 A0A0U1RQF3 1178 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 A0A1W2PQ45 241 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 A0A1W2PQY0 241 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 GABRDO14764 452 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 PEX11AO75192 247 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 AGTP01019 485 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 LMNAP02545 664 aaKnown RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 THP07101 528 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CKBP12277 381 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CDKN2BP42772 138 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 RPL34P49207 117 aaKnown RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 C15orf59Q2T9L4 293 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 KCNT1Q5JUK3 1230 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 WASHC2DQ5SRD0 308 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 NECAB2Q7Z6G3 386 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 UBE2Q1Q7Z7E8 422 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 AGGF1Q8N302 714 aaeCLIP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 ANKRD52Q8NB46 1076 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 SLC2A14Q8TDB8 520 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 RXFP2Q8WXD0 754 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 LINC01599Q8WXQ3 324 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 SNX25Q9H3E2 840 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 PDP2Q9P2J9 529 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 PRKAG3Q9UGI9 489 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 LRCH1Q9Y2L9 728 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 NEU2Q9Y3R4 380 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CASTOR2A6NHX0 329 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 PODXLO00592 558 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 HUS1O60921 280 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CD48P09326 243 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 GPD1P21695 349 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 MIPP30301 263 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 PTPN7P35236 360 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 ZNF143P52747 638 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 DRG2P55039 364 aaKnown RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 POLNQ7Z5Q5 900 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 ZNF598Q86UK7 904 aaKnown RBP13.56□□□□□ -0.24
CPNE1-201ENST00000317677 SCUBE3Q8IX30 993 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 B3GALNT2Q8NCR0 500 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 KCNV2Q8TDN2 545 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 ADAM33Q9BZ11 813 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 SLC38A7Q9NVC3 462 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 GALNT8Q9NY28 637 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 STK38LQ9Y2H1 464 aa13.56□□□□□ -0.24
CPNE1-201ENST00000317677 CLDN5O00501 218 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 BEST1O76090 585 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 PDHA1P08559 390 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 IVDP26440 423 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 SLC6A3Q01959 620 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 BST2Q10589 180 aaKnown RBP13.55□□□□□ -0.24
CPNE1-201ENST00000317677 TAZQ16635 292 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 UPP1Q16831 310 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 CCDC14Q49A88 953 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 TNFAIP8L3Q5GJ75 292 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 KAZNQ674X7 775 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 RNF169Q8NCN4 708 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 FBXO25Q8TCJ0 367 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 GLT1D1Q96MS3 346 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 TSEN34Q9BSV6 310 aaKnown RBP13.55□□□□□ -0.24
CPNE1-201ENST00000317677 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 CRTAC1Q9NQ79 661 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 HESX1Q9UBX0 185 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 PCSK1NQ9UHG2 260 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 OGDHLQ9ULD0 1010 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 NOD1Q9Y239 953 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 TIMM13Q9Y5L4 95 aaPredicted RBP13.55□□□□□ -0.24
CPNE1-201ENST00000317677 NR2E3Q9Y5X4 410 aa13.55□□□□□ -0.24
CPNE1-201ENST00000317677 B4GALT3O60512 393 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 UNC5CO95185 931 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 TRUB2O95900 331 aaKnown RBP13.54□□□□□ -0.24
CPNE1-201ENST00000317677 POMCP01189 267 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 DESP17661 470 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 TFE3P19532 575 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-201ENST00000317677 SCNN1BP51168 640 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 BCAT1P54687 386 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 OCRLQ01968 901 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 KRT17Q04695 432 aa13.54□□□□□ -0.24
CPNE1-201ENST00000317677 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
CPNE1-201ENST00000317677 CCNG2Q16589 344 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms