RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 CCDC22O60826 627 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CYP2F1P24903 491 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CNTFP26441 200 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 RGS7P49802 495 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CCNA1P78396 465 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 TIFABQ6ZNK6 161 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 LONP2Q86WA8 852 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 GSDMBQ8TAX9 411 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PTCD3Q96EY7 689 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 SRPK1Q96SB4 655 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 KATNBL1Q9H079 304 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 IQCGQ9H095 443 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 GPATCH2LQ9NWQ4 482 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PLLPQ9Y342 182 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PEX11AO75192 247 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 GRAP2O75791 330 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 ZNF189O75820 626 aaPredicted RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 DLDP09622 509 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 MLNP12872 115 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CALB2P22676 271 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 L1CAMP32004 1257 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 ACADSBP45954 432 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 INHBEP58166 350 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 SEMA5AQ13591 1074 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 GRIK4Q16099 956 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CA9Q16790 459 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 CMPK2Q5EBM0 449 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 ACOT1Q86TX2 421 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PSTKQ8IV42 348 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 PPM1NQ8N819 430 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 EBNA1BP2Q99848 306 aaKnown RBP20.24■□□□□ 0.83
AP3S1-201ENST00000316788 KCNK13Q9HB14 408 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 HEY1Q9Y5J3 304 aa20.24■□□□□ 0.83
AP3S1-201ENST00000316788 H3BRB1 525 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 GABBR2O75899 941 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 PIAS1O75925 651 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 CBX6O95503 412 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 GNAZP19086 355 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 BCAT1P54687 386 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 BST2Q10589 180 aaKnown RBP20.23■□□□□ 0.83
AP3S1-201ENST00000316788 MARCH8Q5T0T0 291 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 STXBP5Q5T5C0 1151 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 ATG16L1Q676U5 607 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 ZNF449Q6P9G9 518 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 SLC27A1Q6PCB7 646 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 HACE1Q8IYU2 909 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 CRYBG2Q8N1P7 616 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 ANKRD52Q8NB46 1076 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 SIGLEC10Q96LC7 697 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 TUT1Q9H6E5 874 aaKnown RBP20.23■□□□□ 0.83
AP3S1-201ENST00000316788 KCNK4Q9NYG8 393 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 SIRPGQ9P1W8 387 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 HEY2Q9UBP5 337 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 SNX9Q9Y5X1 595 aa20.23■□□□□ 0.83
AP3S1-201ENST00000316788 RRN3P2A6NIE6 340 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 A6NJR5 290 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 BIRC5O15392 142 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 AVILO75366 819 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 RFPL1O75677 317 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 APRTP07741 180 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 BGNP21810 368 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 TAF1CQ15572 869 aaPredicted RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 STEAP4Q687X5 459 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 UNC5AQ6ZN44 842 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 ZNF534Q76KX8 674 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 BZW1Q7L1Q6 419 aaKnown RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 STRADAQ7RTN6 431 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 TTC17Q96AE7 1141 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 NSL1Q96IY1 281 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 HSFY1Q96LI6 401 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 TMEM120AQ9BXJ8 343 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 MMADHCQ9H3L0 296 aaPredicted RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 SLC5A4Q9NY91 659 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 DCTN4Q9UJW0 460 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 SLC45A1Q9Y2W3 748 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 PCDHA11Q9Y5I1 949 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 PIK3R2O00459 728 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 DIAPH2O60879 1101 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 FDFT1P37268 417 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 SARNPP82979 210 aaKnown RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 CRHR2Q13324 411 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 MTM1Q13496 603 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 NAB1Q13506 487 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 CRYMQ14894 314 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 CTAGE3PQ8IX95 158 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 GPRC5AQ8NFJ5 357 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 BTBD10Q9BSF8 475 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 ADAMTS10Q9H324 1103 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 EIF2B3Q9NR50 452 aaKnown RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.22■□□□□ 0.83
AP3S1-201ENST00000316788 NME7Q9Y5B8 376 aa20.22■□□□□ 0.83
AP3S1-201ENST00000316788 THSD7BQ9C0I4 1608 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 A0A0G2JND7 137 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 I3L4J1 428 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 STRNO43815 780 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 NPTXRO95502 500 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 ZNF286BP0CG31 522 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 EPHB2P29323 1055 aa20.21■□□□□ 0.83
AP3S1-201ENST00000316788 HOXA11P31270 313 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms