RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 EVC2Q86UK5 1308 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 MARCH11A6NNE9 402 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 ZAR1LA6NP61 321 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 PATE3B3GLJ2 98 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 E7ENX8 843 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 HOXC11O43248 304 aaPredicted RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 FAM20BO75063 409 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TBX18O95935 607 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 RHOP08100 348 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 ZSCAN22P10073 491 aaPredicted RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 HIBADHP31937 336 aaKnown RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 PBX1P40424 430 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 GATMP50440 423 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 RPS7P62081 194 aaKnown RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TIAL1Q01085 375 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TAP2Q03519 686 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 CRHR2Q13324 411 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 RPS6KA2Q15349 733 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 P3H1Q32P28 736 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TRIM60Q495X7 471 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TMEM196Q5HYL7 178 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 ATPAF1Q5TC12 328 aaPredicted RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 SYNE3Q6ZMZ3 975 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 DPY19L3Q6ZPD9 716 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 PIK3AP1Q6ZUJ8 805 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 MICALCLQ6ZW33 695 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 RAB11FIP2Q7L804 512 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TBC1D1Q86TI0 1168 aaPredicted RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 FSTL5Q8N475 847 aaPredicted RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 SUN3Q8TAQ9 357 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TWNKQ96RR1 684 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TWSG1Q9GZX9 223 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 CHODLQ9H9P2 273 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 TMEM160Q9NX00 188 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 NEXMIFQ5QGS0 1516 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 ERVK-7P63135 1459 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 KDM5AP29375 1690 aaKnown RBP4.56□□□□□ -1.68
SMCO3-201ENST00000316048 NPC1L1Q9UHC9 1359 aa4.56□□□□□ -1.68
SMCO3-201ENST00000316048 ARHGEF40Q8TER5 1519 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 GOLGA6L6A8MZA4 724 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 HMGB1P1B2RPK0 211 aaPredicted RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 E7EVH7 732 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 STX16-NPEPL1H3BU86 382 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 STX16O14662 325 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 IFIT1P09914 478 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ZFP36P26651 326 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 DDIT3P35638 169 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 RXRGP48443 463 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 PDE6CP51160 858 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 CLCN2P51788 898 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 FAM3BP58499 235 aaPredicted RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ACTR2P61160 394 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 LRRC24Q50LG9 513 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 TICAM2Q86XR7 235 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 OR6Y1Q8NGX8 325 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ABHD5Q8WTS1 349 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 OSCP1Q8WVF1 389 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ATRIPQ8WXE1 791 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ALOXE3Q9BYJ1 711 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 TPSD1Q9BZJ3 242 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 XYLT2Q9H1B5 865 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ALG13Q9NP73 1137 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 G6PC2Q9NQR9 355 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 PCDHB7Q9Y5E2 793 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 FPGT-TNNI3KV9GXZ4 949 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 CLTCQ00610 1675 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 TMEM131LA2VDJ0 1609 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 MYADML2A6NDP7 307 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 FAM90A20PA6NIJ5 464 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 M0QZQ0 153 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 LDHCP07864 332 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 CAPN3P20807 821 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 DRD1P21728 446 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 PRKAR1BP31321 381 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 AARSP49588 968 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 UBE3AQ05086 875 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ICAM4Q14773 271 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 HLXQ14774 488 aaPredicted RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ICE2Q659A1 982 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 MAVSQ7Z434 540 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 SUPT20HQ8NEM7 779 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 FAM136AQ96C01 138 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ADAM2Q99965 735 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 AMBRA1Q9C0C7 1298 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 OSBPL5Q9H0X9 879 aaPredicted RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 RMI1Q9H9A7 625 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 UNKLQ9H9P5 680 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 STK26Q9P289 416 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 C19orf53Q9UNZ5 99 aaPredicted RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 USP22Q9UPT9 525 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 RCE1Q9Y256 329 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 MYO3AQ8NEV4 1616 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ADGRB1O14514 1584 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 SPATA31D1Q6ZQQ2 1576 aa4.55□□□□□ -1.68
SMCO3-201ENST00000316048 LRPPRCP42704 1394 aaKnown RBP4.55□□□□□ -1.68
SMCO3-201ENST00000316048 ASXL1Q8IXJ9 1541 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 SPATA31A3Q5VYP0 1347 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 UNC119BA6NIH7 251 aa4.54□□□□□ -1.68
SMCO3-201ENST00000316048 EXOC5O00471 708 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms