RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 OLFML1Q6UWY5 402 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 XYLT1Q86Y38 959 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 FMNL3Q8IVF7 1028 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DEFB106AQ8N104 65 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 RNF139Q8WU17 664 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DEPDC1BQ8WUY9 529 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 IRGQQ8WZA9 623 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 GOLGA1Q92805 767 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 C18orf8Q96DM3 657 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 SYT11Q9BT88 431 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.22□□□□□ -1.09
CDC42-201ENST00000315554 KLF16Q9BXK1 252 aaPredicted RBP8.22□□□□□ -1.09
CDC42-201ENST00000315554 FAM117AQ9C073 453 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 LINC00597Q9H2U6 94 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 EBF3Q9H4W6 596 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 CLIC5Q9NZA1 410 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 MARCH2Q9P0N8 246 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 COX16Q9P0S2 106 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DNMT3LQ9UJW3 386 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 FBXL21Q9UKT6 434 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DUSP12Q9UNI6 340 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 MYO10Q9HD67 2058 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DENND4CQ5VZ89 1909 aa8.22□□□□□ -1.09
CDC42-201ENST00000315554 DDX3XO00571 662 aaKnown RBP eCLIP8.21□□□□□ -1.093e-12■■■□□ 16
CDC42-201ENST00000315554 CAPN9O14815 690 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 MFAP3LO75121 409 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 ADCY5O95622 1261 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 PDGFBP01127 241 aaPredicted RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 SRFP11831 508 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 UNGP13051 313 aaPredicted RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 WEE1P30291 646 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 PRKCIP41743 596 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 NSFP46459 744 aaKnown RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 IFNAR2P48551 515 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 TUBP50607 506 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 SLC6A3Q01959 620 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 TBX2Q13207 712 aaPredicted RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 TRIM14Q14142 442 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 FAM102AQ5T9C2 384 aaPredicted RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 TRIM72Q6ZMU5 477 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 TAC4Q86UU9 113 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 PACS2Q86VP3 889 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 DRC7Q8IY82 874 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 SCML4Q8N228 414 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 SPC24Q8NBT2 197 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 DQX1Q8TE96 717 aaKnown RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 NXPE3Q969Y0 559 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 E2F7Q96AV8 911 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 KIF9Q9HAQ2 790 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 METTL5Q9NRN9 209 aaKnown RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 HEBP1Q9NRV9 189 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 ABCC13Q9NSE7 274 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 DUS2Q9NX74 493 aaKnown RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 OBP2AQ9NY56 170 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 GTSE1Q9NYZ3 720 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 ADAM22Q9P0K1 906 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 ARHGAP20Q9P2F6 1191 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 ZMYM5Q9UJ78 669 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 SH3BP1Q9Y3L3 701 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 NUP210Q8TEM1 1887 aaPredicted RBP8.21□□□□□ -1.09
CDC42-201ENST00000315554 A0A0C4DFX4 3053 aa8.21□□□□□ -1.09
CDC42-201ENST00000315554 VCANP13611 3396 aa8.21□□□□□ -1.1
CDC42-201ENST00000315554 KRBA1A5PL33 1030 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 OTOL1A6NHN0 477 aaPredicted RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 AKR1B15C9JRZ8 316 aaPredicted RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 PI4K2BG5E9Z4 385 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 SART1O43290 800 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 STC2O76061 302 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 SERPING1P05155 500 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 TPM1P09493 284 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 PFKLP17858 780 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 TFE3P19532 575 aaPredicted RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 CD72P21854 359 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 MMP8P22894 467 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 EIF4A3P38919 411 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 GABRB2P47870 512 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 VCPP55072 806 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 CENPCQ03188 943 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 FCHO2Q0JRZ9 810 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 PTP4A2Q12974 167 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 ARHGAP29Q52LW3 1261 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 DCAF6Q58WW2 860 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 NAIF1Q69YI7 327 aaPredicted RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 TRNP1Q6NT89 227 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 WDR59Q6PJI9 974 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 TOGARAM2Q6ZUX3 1019 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 MON1BQ7L1V2 547 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 TADA2BQ86TJ2 420 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 BBS7Q8IWZ6 715 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 UBALD2Q8IYN6 164 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 SIX5Q8N196 739 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 EMC1Q8N766 993 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 MSANTD4Q8NCY6 345 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 OR8K1Q8NGG5 319 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 JOSD2Q8TAC2 188 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 CSGALNACT1Q8TDX6 532 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 SYN2Q92777 582 aaPredicted RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 EDAQ92838 391 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms