RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 ARCQ7LC44 396 aa23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 MIB1Q86YT6 1006 aa23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 NPY6RQ99463 290 aa23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 SMG9Q9H0W8 520 aaKnown RBP23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 RASAL2Q9UJF2 1139 aa23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 USP15Q9Y4E8 981 aaPredicted RBP23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 SPTBN5Q9NRC6 3674 aaKnown RBP23.39■■□□□ 1.34
CCDC85B-201ENST00000312579 GRXCR2A6NFK2 248 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 SDC4P31431 198 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 ZNF143P52747 638 aaPredicted RBP23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 BEND5Q7L4P6 421 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 NACA2Q9H009 215 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 POMKQ9H5K3 350 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 SLITRK6Q9H5Y7 841 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 PRDM6Q9NQX0 595 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 HYOU1Q9Y4L1 999 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 M0QYT0 321 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 MYO1FO00160 1098 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 DPYSL4O14531 572 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 BUB1BO60566 1050 aaPredicted RBP23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 TRUB2O95900 331 aaKnown RBP23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 HDCP19113 662 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 NME3Q13232 169 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 SLC25A52Q3SY17 297 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 RNF10Q8N5U6 811 aaKnown RBP23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 ST13P5Q8NFI4 369 aaPredicted RBP23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 TPCN2Q8NHX9 752 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 HLA-CQ95604 372 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 ALS2CR12Q96Q35 445 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 TRIM62Q9BVG3 475 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 FAM204AQ9H8W3 233 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 SMPD4Q9NXE4 827 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 MARCH2Q9P0N8 246 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 USTQ9Y2C2 406 aa23.38■■□□□ 1.33
CCDC85B-201ENST00000312579 ATP5C1P36542 298 aaKnown RBP23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 TUBP50607 506 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 ARHGAP15Q53QZ3 475 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 MSANTD2Q6P1R3 559 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 ARFGAP1Q8N6T3 406 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 MAFAQ8NHW3 353 aaPredicted RBP23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 FAM172AQ8WUF8 416 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 NT5C3BQ969T7 300 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 RIPOR3Q96MK2 946 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 CNPY3Q9BT09 278 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 SMOC2Q9H3U7 446 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 TASP1Q9H6P5 420 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 GKN1Q9NS71 199 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 DDIT4Q9NX09 232 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 IP6K2Q9UHH9 426 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 DNMT3LQ9UJW3 386 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 CAPN6Q9Y6Q1 641 aa23.37■■□□□ 1.33
CCDC85B-201ENST00000312579 HMBSP08397 361 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 MBL2P11226 248 aaPredicted RBP23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 PTPN9P43378 593 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 ZXDBP98169 803 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 NPAS3Q8IXF0 933 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 TRIM58Q8NG06 486 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 FNIP1Q8TF40 1166 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 SUSD6Q92537 303 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 FGF13Q92913 245 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 PIGVQ9NUD9 493 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 STAP1Q9ULZ2 295 aa23.36■■□□□ 1.33
CCDC85B-201ENST00000312579 TRAV19A0A0A6YYK7 116 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 SLC12A8A0AV02 714 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 GRID2IPA4D2P6 1211 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 CTAGE9A4FU28 777 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 FANCGO15287 622 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 OLFM2O95897 454 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 IGLV3-25P01717 112 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 CKMP06732 381 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 TCF4P15884 667 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 SP100P23497 879 aaPredicted RBP23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 MTHFRP42898 656 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 HADHBP55084 474 aaKnown RBP23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 TTC16Q8NEE8 873 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 WBP2Q969T9 261 aa23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 NAPGQ99747 312 aaPredicted RBP23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 OLA1Q9NTK5 396 aaKnown RBP23.35■■□□□ 1.33
CCDC85B-201ENST00000312579 PALMO75781 387 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 PROSCO94903 275 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 HDAC4P56524 1084 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 DEUP1Q05D60 604 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 IFI16Q16666 785 aaKnown RBP23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 BNIPLQ7Z465 357 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 CMTM8Q8IZV2 173 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 ZNF276Q8N554 614 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 CENPIQ92674 756 aaPredicted RBP23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 ZFRQ96KR1 1074 aaKnown RBP23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 MYADMQ96S97 322 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 CDK5RAP1Q96SZ6 601 aaKnown RBP23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 CCL26Q9Y258 94 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 CPQQ9Y646 472 aa23.34■■□□□ 1.33
CCDC85B-201ENST00000312579 IRAK2O43187 625 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 MBTPS2O43462 519 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 PRAMEF12O95522 483 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 IRF1P10914 325 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 TFF2Q03403 129 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 KLHDC10Q6PID8 442 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 TADA2BQ86TJ2 420 aa23.33■■□□□ 1.33
CCDC85B-201ENST00000312579 FAM131BQ86XD5 332 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms