RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TTYH3Q9C0H2 523 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PDCL3Q9H2J4 239 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 TSPY26PQ9H489 355 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 TRPV5Q9NQA5 729 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 GOLGA8SH3BPF8 625 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 I6L893 689 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PLEKP08567 350 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-201ENST00000311943 RALAP11233 206 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-201ENST00000311943 PDE6CP51160 858 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 NOMO3P69849 1222 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 DMWDQ09019 674 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 STILQ15468 1287 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 ANO4Q32M45 955 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 OTUD1Q5VV17 481 aaPredicted RBP12.59□□□□□ -0.39
SCFD1-201ENST00000311943 RFWD3Q6PCD5 774 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 IRF2BP2Q7Z5L9 587 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 DEFB106AQ8N104 65 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 EMC1Q8N766 993 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 MAGEB5Q9BZ81 275 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 HCN2Q9UL51 889 aa12.59□□□□□ -0.39
SCFD1-201ENST00000311943 E2F8A0AVK6 867 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 NEDD8-MDP1E9PL57 170 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 TCF3P15923 654 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 CCINQ13939 588 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 DCAF6Q58WW2 860 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 NADSYN1Q6IA69 706 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 HTR3DQ70Z44 454 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 CACNA2D4Q7Z3S7 1137 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 DTWD2Q8NBA8 298 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 RNF139Q8WU17 664 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 C11orf70Q9BRQ4 267 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 DNAI2Q9GZS0 605 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 LHX5Q9H2C1 402 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 ABCC13Q9NSE7 274 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 SNX10Q9Y5X0 201 aa12.58□□□□□ -0.4
SCFD1-201ENST00000311943 GOLGA6L19H0YKK7 550 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 SLC6A4P31645 630 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 STAT1P42224 750 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 CDR2Q01850 454 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 PDGFRLQ15198 375 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 RALGPS2Q86X27 583 aaPredicted RBP12.57□□□□□ -0.4
SCFD1-201ENST00000311943 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 SPHK2Q9NRA0 654 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 SEPT11Q9NVA2 429 aaKnown RBP12.57□□□□□ -0.4
SCFD1-201ENST00000311943 K7EQS6 105 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 RNF40O75150 1001 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 MOCS2O96007 188 aaPredicted RBP12.57□□□□□ -0.4
SCFD1-201ENST00000311943 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
SCFD1-201ENST00000311943 PTMSP20962 102 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 FLT3P36888 993 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 PSEN1P49768 467 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 SATB1Q01826 763 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 PTP4A2Q12974 167 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 ZC3H12AQ5D1E8 599 aaKnown RBP12.57□□□□□ -0.4
SCFD1-201ENST00000311943 TMEM196Q5HYL7 178 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 KLHDC10Q6PID8 442 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 XYLT1Q86Y38 959 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 JOSD2Q8TAC2 188 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 WFDC5Q8TCV5 224 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 STK32AQ8WU08 396 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 SHDQ96IW2 340 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 FAM81BQ96LP2 452 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 P2RY13Q9BPV8 354 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 ZMYM5Q9UJ78 669 aa12.57□□□□□ -0.4
SCFD1-201ENST00000311943 TULP3O75386 442 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 ADH5P11766 374 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 UNGP13051 313 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 CDH5P33151 784 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 IRAK1P51617 712 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 ANGPT1Q15389 498 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 C2orf27AQ580R0 203 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 CFAP52Q8N1V2 620 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 PHTF2Q8N3S3 785 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 CPA6Q8N4T0 437 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 FCRL2Q96LA5 508 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 SYT11Q9BT88 431 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 SPATA6Q9NWH7 488 aaPredicted RBP12.56□□□□□ -0.4
SCFD1-201ENST00000311943 R4GN57 208 aa12.56□□□□□ -0.4
SCFD1-201ENST00000311943 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 GYPCP04921 128 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 TYRP14679 529 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 HNRNPLP14866 589 aaKnown RBP eCLIP12.55□□□□□ -0.43e-7■■□□□ 12.7
SCFD1-201ENST00000311943 PFKLP17858 780 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 WASP42768 502 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 NME3Q13232 169 aa12.55□□□□□ -0.4
SCFD1-201ENST00000311943 SRSF5Q13243 272 aaKnown RBP12.55□□□□□ -0.4
SCFD1-201ENST00000311943 ERICH1Q86X53 443 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms