RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 SRGAP2CP0DJJ0 459 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 SRGAP2BP0DMP2 458 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 DESP17661 470 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 POLR2BP30876 1174 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 GRIA1P42261 906 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CRADDP78560 199 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 TRPC3Q13507 836 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 TUBB3Q13509 450 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CAND1Q86VP6 1230 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MAP7D3Q8IWC1 876 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 JADE3Q92613 823 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CLMNQ96JQ2 1002 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 LRGUKQ96M69 825 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ZSCAN9O15535 394 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 DGKIO75912 1065 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 C1QAP02745 245 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CD1EP15812 388 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 PCSK6P29122 969 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CRHR1P34998 444 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CAP2P40123 477 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 IDH3AP50213 366 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ADARP55265 1226 aaKnown RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 MCCD1P59942 119 aaPredicted RBP15.17■□□□□ 0.02
COL6A2-202ENST00000310645 OSTNP61366 133 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CLDN10P78369 228 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 PRKCEQ02156 737 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CYTH1Q15438 398 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 C6orf52Q5T4I8 152 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 FBXW8Q8N3Y1 598 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ACTRT2Q8TDY3 377 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 CPXM1Q96SM3 734 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 RNPEPQ9H4A4 650 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 PLAC1Q9HBJ0 212 aa15.17■□□□□ 0.02
COL6A2-202ENST00000310645 ATP9BO43861 1147 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 LSM8O95777 96 aaKnown RBP15.16■□□□□ 0.02
COL6A2-202ENST00000310645 PGM2L1Q6PCE3 622 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 MCF2L2Q86YR7 1114 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 NIPA2Q8N8Q9 360 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 PGBD4Q96DM1 585 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 CMTM5Q96DZ9 223 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 COPS7BQ9H9Q2 264 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-202ENST00000310645 C17orf75Q9HAS0 396 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 ACSS2Q9NR19 701 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 CYP26B1Q9NR63 512 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 EFR3BQ9Y2G0 817 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 AP4B1Q9Y6B7 739 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 SF3B1O75533 1304 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL6A2-202ENST00000310645 A0A0J9YVX5 310 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 SLC15A5A6NIM6 579 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 POLRMTO00411 1230 aaKnown RBP15.16■□□□□ 0.02
COL6A2-202ENST00000310645 DNAJA2O60884 412 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 ATP6V1G1O75348 118 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 KRT19P08727 400 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 SERPINB5P36952 375 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 PRKG1Q13976 671 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 KRT81Q14533 505 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 TMEM259Q4ZIN3 620 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 STRIP1Q5VSL9 837 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 NIPA1Q7RTP0 329 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 MAVSQ7Z434 540 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 C10orf107Q8IVU9 208 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 PQLC1Q8N2U9 271 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 ATP6V0A1Q93050 837 aa15.16■□□□□ 0.02
COL6A2-202ENST00000310645 HEMK1Q9Y5R4 338 aaPredicted RBP15.16■□□□□ 0.02
COL6A2-202ENST00000310645 GOLGA8QA0A0J9YX86 632 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 GOLGA8OA6NCC3 632 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 GOLGA8NF8WBI6 632 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 H3BNX3 289 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CHADO15335 359 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CRTAMO95727 393 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 NELFEP18615 380 aaKnown RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ZNF132P52740 706 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CDH8P55286 799 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ATG14Q6ZNE5 492 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CCDC60Q8IWA6 550 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 TMEM130Q8N3G9 435 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 KLC2Q9H0B6 622 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 RSAD1Q9HA92 442 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PAK5Q9P286 719 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CNTN6Q9UQ52 1028 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 NR2E3Q9Y5X4 410 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 TTLL13PA6NNM8 815 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 H3BSA7 217 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ENTPD3O75355 529 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ADORA2AP29274 412 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 SNAPC2Q13487 334 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 NOMO1Q15155 1222 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 C15orf59Q2T9L4 293 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PPM1JQ5JR12 505 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ATXN7L3BQ96GX2 97 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ZNF341Q9BYN7 854 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 FRMD8P1Q9BZ68 369 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 Q9H521 79 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 LIN28AQ9H9Z2 209 aaKnown RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PICK1Q9NRD5 415 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms