RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ARCQ7LC44 396 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 LRRC8AQ8IWT6 810 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 WBP2Q969T9 261 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 ARHGEF26Q96DR7 871 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 CFAP57Q96MR6 1250 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 CD320Q9NPF0 282 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 CFAP97Q9P2B7 532 aa13.45□□□□□ -0.26
APTX-201ENST00000309615 NUP210Q8TEM1 1887 aaPredicted RBP13.45□□□□□ -0.26
APTX-201ENST00000309615 C2CD4BA6NLJ0 364 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 LCA5LO95447 670 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 TRUB2O95900 331 aaKnown RBP13.44□□□□□ -0.26
APTX-201ENST00000309615 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 GPC5P78333 572 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 USP4Q13107 963 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 GRM2Q14416 872 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 OTUD1Q5VV17 481 aaPredicted RBP13.44□□□□□ -0.26
APTX-201ENST00000309615 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 RXFP2Q8WXD0 754 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 NT5C3BQ969T7 300 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
APTX-201ENST00000309615 KIF9Q9HAQ2 790 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 OBP2AQ9NY56 170 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 CALCOCO1Q9P1Z2 691 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 IGSF9Q9P2J2 1179 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 SYNJ2BP-COX16A0A087WUM0 186 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 EIF3CLB5ME19 914 aaKnown RBP13.44□□□□□ -0.26
APTX-201ENST00000309615 STC2O76061 302 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 IGLV3-25P01717 112 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 CYP1A2P05177 515 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 COG7P83436 770 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 SPA17Q15506 151 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 SLC25A52Q3SY17 297 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 DCUN1D2Q6PH85 259 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 MFSD6LQ8IWD5 586 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 BPIFB1Q8TDL5 484 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 TBCBQ99426 244 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 NPY6RQ99463 290 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 EIF3CQ99613 913 aaKnown RBP13.44□□□□□ -0.26
APTX-201ENST00000309615 TRIM7Q9C029 511 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 DDIT4Q9NX09 232 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 COX16Q9P0S2 106 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 STAP1Q9ULZ2 295 aa13.44□□□□□ -0.26
APTX-201ENST00000309615 M0QYT0 321 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 GREM1O60565 184 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 TMEM253P0C7T8 217 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 TCF3P15923 654 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 PSMC3P17980 439 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 MAGEA1P43355 309 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 SULT1E1P49888 294 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 ATP11AP98196 1134 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 OGDHQ02218 1023 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 NME3Q13232 169 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 C15orf59Q2T9L4 293 aaPredicted RBP13.43□□□□□ -0.26
APTX-201ENST00000309615 CCDC14Q49A88 953 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 DDX42Q86XP3 938 aaKnown RBP eCLIP13.43□□□□□ -0.26
APTX-201ENST00000309615 RNF135Q8IUD6 432 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 GJD3Q8N144 294 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 CTNNBL1Q8WYA6 563 aaPredicted RBP13.43□□□□□ -0.26
APTX-201ENST00000309615 NXPE3Q969Y0 559 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 ZFYVE19Q96K21 471 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 SERPINB11Q96P15 392 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 TFR2Q9UP52 801 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
APTX-201ENST00000309615 HBS1LQ9Y450 684 aaKnown RBP13.43□□□□□ -0.26
APTX-201ENST00000309615 PCDHA13Q9Y5I0 950 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 SCINQ9Y6U3 715 aa13.43□□□□□ -0.26
APTX-201ENST00000309615 TMEM191CA6NGB0 347 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 IRAK2O43187 625 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 IGLV3-27P01718 113 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 KLKB1P03952 638 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 GPD1P21695 349 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 SDC4P31431 198 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 FCHO2Q0JRZ9 810 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 EIF4EBP2Q13542 120 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 TRIP4Q15650 581 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 CDO1Q16878 200 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 RAB6CQ53S08 254 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 C10orf76Q5T2E6 689 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 ACRBPQ8NEB7 543 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 CCDC112Q8NEF3 446 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 ASIC4Q96FT7 647 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 FCRL2Q96LA5 508 aaPredicted RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 DESI2Q9BSY9 194 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 TRMT61BQ9BVS5 477 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 NUP85Q9BW27 656 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 RAB6CQ9H0N0 254 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 MRPL47Q9HD33 250 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 RRN3Q9NYV6 651 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 TLR6Q9Y2C9 796 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 HELZP42694 1942 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 E2F8A0AVK6 867 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
APTX-201ENST00000309615 GBP1P32455 592 aa13.42□□□□□ -0.26
APTX-201ENST00000309615 PTPN9P43378 593 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms