RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PRG3Q9Y2Y8 225 aaPredicted RBP22.08■■□□□ 1.12
ATG4D-201ENST00000309469 PCDHB7Q9Y5E2 793 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 USP3Q9Y6I4 520 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 CFAP69A5D8W1 941 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 SMIM23A6NLE4 172 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 A6NNZ2 444 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 DCDC2CA8MYV0 355 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 GOT1P17174 413 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 NR2C2P49116 596 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 NRLP54845 237 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 MTFR1Q15390 333 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 TUBB8Q3ZCM7 444 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 C4orf50Q6ZRC1 276 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 SPATA2LQ8IUW3 424 aaPredicted RBP22.07■■□□□ 1.12
ATG4D-201ENST00000309469 SEPT8Q92599 483 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 SLC9A7Q96T83 725 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 RRN3Q9NYV6 651 aa22.07■■□□□ 1.12
ATG4D-201ENST00000309469 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-201ENST00000309469 RGS16O15492 202 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-201ENST00000309469 KCNN4O15554 427 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 OAZ2O95190 189 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 AMPD1P23109 780 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 RBL1P28749 1068 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 ANKRD22Q5VYY1 191 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 CENPUQ71F23 418 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 ABI1Q8IZP0 508 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 SCML4Q8N228 414 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 RTP4Q96DX8 246 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 PGAP3Q96FM1 320 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-201ENST00000309469 PRDM16Q9HAZ2 1276 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 TMPRSS4Q9NRS4 437 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 SMAPO00193 183 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 TRAPPC3O43617 180 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 TADA2AO75478 443 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 MAP3K6O95382 1288 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 SLCO1A2P46721 670 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 IRAK1P51617 712 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 GBE1Q04446 702 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 SLC10A2Q12908 348 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-201ENST00000309469 XRCC4Q13426 336 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 TAB3Q8N5C8 712 aaPredicted RBP22.06■■□□□ 1.12
ATG4D-201ENST00000309469 ADAM32Q8TC27 787 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 OGDHLQ9ULD0 1010 aa22.06■■□□□ 1.12
ATG4D-201ENST00000309469 H3BRJ5 948 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 GOLGA8MH3BSY2 632 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 ALOX15BO15296 676 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 PQBP1O60828 265 aaKnown RBP22.05■■□□□ 1.12
ATG4D-201ENST00000309469 ADRA1BP35368 520 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 AIF1P55008 147 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 PPP2R2AP63151 447 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 GNGT1P63211 74 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 AUHQ13825 339 aaKnown RBP22.05■■□□□ 1.12
ATG4D-201ENST00000309469 EFHC2Q5JST6 749 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 NCBP2-AS2Q69YL0 99 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 FAM43BQ6ZT52 329 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-201ENST00000309469 CDKL3Q8IVW4 592 aaPredicted RBP22.05■■□□□ 1.12
ATG4D-201ENST00000309469 EDEM1Q92611 657 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 NTAN1Q96AB6 310 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 TTC25Q96NG3 672 aa22.05■■□□□ 1.12
ATG4D-201ENST00000309469 WDR6Q9NNW5 1121 aaKnown RBP22.05■■□□□ 1.12
ATG4D-201ENST00000309469 AGTP01019 485 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 HIF1AQ16665 826 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ZSCAN26Q16670 478 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 LONRF1Q17RB8 773 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 BSPRYQ5W0U4 402 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 TTC19Q6DKK2 380 aaPredicted RBP22.04■■□□□ 1.12
ATG4D-201ENST00000309469 MFSD5Q6N075 450 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 RNF139Q8WU17 664 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 APBB2Q92870 758 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 SERPINB12Q96P63 405 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 CASD1Q96PB1 797 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ZCWPW1Q9H0M4 648 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ETNK2Q9NVF9 386 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 PAK5Q9P286 719 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 TCEA3O75764 348 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 F9P00740 461 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ABHD2P08910 425 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 OR4Q2P0C623 313 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ARL4CP56559 192 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 BASP1P80723 227 aaKnown RBP22.04■■□□□ 1.12
ATG4D-201ENST00000309469 PDIA2Q13087 525 aaKnown RBP22.04■■□□□ 1.12
ATG4D-201ENST00000309469 PHACTR1Q9C0D0 580 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 RNF208Q9H0X6 261 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 STMN4Q9H169 189 aaPredicted RBP22.04■■□□□ 1.12
ATG4D-201ENST00000309469 ARHGEF4Q9NR80 690 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 DDIT4Q9NX09 232 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 FBXW11Q9UKB1 542 aa22.04■■□□□ 1.12
ATG4D-201ENST00000309469 TCRBV7S3A2A0A539 114 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 CCL5P13501 91 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 GRIK1P39086 918 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 IFI35P80217 286 aaPredicted RBP22.03■■□□□ 1.12
ATG4D-201ENST00000309469 GAD2Q05329 585 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 FASTKD3Q14CZ7 662 aaKnown RBP22.03■■□□□ 1.12
ATG4D-201ENST00000309469 TCTN1Q2MV58 587 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 SLC39A12Q504Y0 691 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 SLC45A4Q5BKX6 768 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 TNFAIP8L3Q5GJ75 292 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 LRRC31Q6UY01 552 aa22.03■■□□□ 1.12
ATG4D-201ENST00000309469 DCP1BQ8IZD4 617 aaKnown RBP22.03■■□□□ 1.12
ATG4D-201ENST00000309469 SCAMP5Q8TAC9 235 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms