RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 UNC5BQ8IZJ1 945 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 FAM172AQ8WUF8 416 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 PRPF18Q99633 342 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 COL4A5P29400 1685 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MAFGO15525 162 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 LRCH4O75427 683 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MT-CO1P00395 513 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 SLC4A1P02730 911 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 GSTA2P09210 222 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 TFE3P19532 575 aaPredicted RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MMP8P22894 467 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 CD101Q93033 1021 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 MRPL46Q9H2W6 279 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 ARHGAP26Q9UNA1 814 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 DLEC1Q9Y238 1755 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 KCNK1O00180 336 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 CLDN5O00501 218 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 LYPLA2O95372 231 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 RBL1P28749 1068 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
RETREG3-201ENST00000309428 NUDT2P50583 147 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 CDK16Q00536 496 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 IER5Q5VY09 327 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 ARHGAP18Q8N392 663 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 ELOVL4Q9GZR5 314 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 C17orf75Q9HAS0 396 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 DTNAQ9Y4J8 743 aa13.09□□□□□ -0.31
RETREG3-201ENST00000309428 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 MYL3P08590 195 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 SNRPAP09012 282 aaKnown RBP13.08□□□□□ -0.31
RETREG3-201ENST00000309428 C6orf222P0C671 652 aaPredicted RBP13.08□□□□□ -0.31
RETREG3-201ENST00000309428 ARF4P18085 180 aaPredicted RBP13.08□□□□□ -0.31
RETREG3-201ENST00000309428 ARHGAP8P85298 464 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 BST1Q10588 318 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 DCAF6Q58WW2 860 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 ARMCX2Q7L311 632 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 RNF135Q8IUD6 432 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.31
RETREG3-201ENST00000309428 EXD1Q8NHP7 514 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 EXT2Q93063 718 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 SDCBP2Q9H190 292 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 UBR3Q6ZT12 1888 aa13.08□□□□□ -0.31
RETREG3-201ENST00000309428 TMEM191CA6NGB0 347 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 ATP9BO43861 1147 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 UGT1A9O60656 530 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 CLPTM1O96005 669 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 GRIA1P42261 906 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 PYROXD2Q8N2H3 581 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 PDZD8Q8NEN9 1154 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 EME1Q96AY2 570 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 SGF29Q96ES7 293 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 TIPINQ9BVW5 301 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 UGT1A7Q9HAW7 530 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 UGT1A10Q9HAW8 530 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 UGT1A8Q9HAW9 530 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 GALNT8Q9NY28 637 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 CPA4Q9UI42 421 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 H3BRB1 525 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 DCXO43602 365 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 LYPLA1O75608 230 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-201ENST00000309428 ANPEPP15144 967 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 RAG1P15918 1043 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 EFNA5P52803 228 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 COPAP53621 1224 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
RETREG3-201ENST00000309428 PKNOX1P55347 436 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 YWHAEP62258 255 aaKnown RBP13.08□□□□□ -0.32
RETREG3-201ENST00000309428 GRIK3Q13003 919 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 DNAL1Q4LDG9 190 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 C9orf131Q5VYM1 1079 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 ZCCHC9Q8N567 271 aaKnown RBP13.08□□□□□ -0.32
RETREG3-201ENST00000309428 STKLD1Q8NE28 680 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 REPS2Q8NFH8 660 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 DPEP3Q9H4B8 488 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 TUT1Q9H6E5 874 aaKnown RBP13.08□□□□□ -0.32
RETREG3-201ENST00000309428 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 MFHAS1Q9Y4C4 1052 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 MYO9BQ13459 2157 aa13.08□□□□□ -0.32
RETREG3-201ENST00000309428 MSCO60682 206 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 LYNP07948 512 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 GM2AP17900 193 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ADORA2AP29274 412 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 PHEXP78562 749 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 MXD4Q14582 209 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 CA9Q16790 459 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 LBX2Q6XYB7 198 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 UTS2BQ765I0 119 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 C12orf56Q8IXR9 622 aa13.07□□□□□ -0.32
RETREG3-201ENST00000309428 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
RETREG3-201ENST00000309428 GPR20Q99678 358 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms