RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 HTR3DQ70Z44 454 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SND1Q7KZF4 910 aaKnown RBP eCLIP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 RNF135Q8IUD6 432 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC44A3Q8N4M1 653 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 FNIP1Q8TF40 1166 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 CTNNBL1Q8WYA6 563 aaPredicted RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 DNASE1L2Q92874 299 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 NT5C3BQ969T7 300 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 ZNF653Q96CK0 615 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 PIWIL1Q96J94 861 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 NCAPGQ9BPX3 1015 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 KXD1Q9BQD3 176 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 DDX23Q9BUQ8 820 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC2A4RGQ9NR83 387 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 METTL5Q9NRN9 209 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 SMPD4Q9NXE4 827 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 CFAP97Q9P2B7 532 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 CNOT8Q9UFF9 292 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 DUSP12Q9UNI6 340 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 NAALADL1Q9UQQ1 740 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 CCL26Q9Y258 94 aa18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 ZNF638Q14966 1978 aaKnown RBP18.67■□□□□ 0.58
SSSCA1-201ENST00000309328 A0A0C4DFX4 3053 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 DOCK8Q8NF50 2099 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC12A8A0AV02 714 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 ZNF263O14978 683 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 LCA5LO95447 670 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 TRUB2O95900 331 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 IGLV3-25P01717 112 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 H2AFZP0C0S5 128 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 PTPN9P43378 593 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 RNASE9P60153 205 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 GPC5P78333 572 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 MAMLD1Q13495 774 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 TAF5Q15542 800 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 C1orf228Q6PIY5 440 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 H2AFVQ71UI9 128 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 OSCP1Q8WVF1 389 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 KHSRPQ92945 711 aaKnown RBP eCLIP18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 ATP2A3Q93084 1043 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 AZIN2Q96A70 460 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 MSANTD3Q96H12 275 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 DDX50Q9BQ39 737 aaKnown RBP18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 IRX2Q9BZI1 471 aaPredicted RBP18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 BRD9Q9H8M2 597 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 FAM204AQ9H8W3 233 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 SLC12A6Q9UHW9 1150 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 DOCK6Q96HP0 2047 aa18.66■□□□□ 0.58
SSSCA1-201ENST00000309328 TCRBV5S1A1TA0A578 114 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 C2CD4BA6NLJ0 364 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 EIF3CLB5ME19 914 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 IRAK2O43187 625 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 GRAP2O75791 330 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 IGLV3-27P01718 113 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 APOEP02649 317 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 TMEM253P0C7T8 217 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 PDGFRAP16234 1089 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 CCR1P32246 355 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 IFNAR2P48551 515 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 MLLT6P55198 1093 aaPredicted RBP18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 TBX4P57082 545 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 AMPD2Q01433 879 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 C2CD6Q53TS8 623 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 PPP1R15BQ5SWA1 713 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 SYPL2Q5VXT5 272 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 TAC4Q86UU9 113 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 NPY6RQ99463 290 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 EIF3CQ99613 913 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 SMG9Q9H0W8 520 aaKnown RBP18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 DDIT4Q9NX09 232 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 UVRAGQ9P2Y5 699 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 NUDT5Q9UKK9 219 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 MYO16Q9Y6X6 1858 aa18.65■□□□□ 0.58
SSSCA1-201ENST00000309328 MDM4O15151 490 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 STC2O76061 302 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 NFATC1O95644 943 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 CYP1A2P05177 515 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 ASGR2P07307 311 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 GPD1P21695 349 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 GDI1P31150 447 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 CHKAP35790 457 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 SLC11A2P49281 568 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 ZNF143P52747 638 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 GALCP54803 685 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 NR1H3Q13133 447 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 PPP2R5DQ14738 602 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 BRMS1LQ5PSV4 323 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 STRADAQ7RTN6 431 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 EXOC4Q96A65 974 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 RSPRY1Q96DX4 576 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 CALR3Q96L12 384 aaKnown RBP18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 MCEEQ96PE7 176 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 FAM83CQ9BQN1 747 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 DUS2Q9NX74 493 aaKnown RBP18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 SFMBT1Q9UHJ3 866 aa18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 EPN1Q9Y6I3 576 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 NUP210Q8TEM1 1887 aaPredicted RBP18.64■□□□□ 0.57
SSSCA1-201ENST00000309328 OBSL1O75147 1896 aa18.63■□□□□ 0.57
SSSCA1-201ENST00000309328 M0QYT0 321 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms