RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 SPDYE2Q495Y8 402 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 SPOPLQ6IQ16 392 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 XKR5Q6UX68 686 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 TMPRSS6Q8IU80 811 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 CTAGE3PQ8IX95 158 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 POMGNT1Q8WZA1 660 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 IFT43Q96FT9 208 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 OTUD5Q96G74 571 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 ACCSQ96QU6 501 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 USP29Q9HBJ7 922 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 RAVER2Q9HCJ3 691 aaKnown RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 SACM1LQ9NTJ5 587 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 PCDHA3Q9Y5H8 950 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 LTBP3Q9NS15 1303 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 PIK3CDO00329 1044 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 ZC3H11AO75152 810 aaKnown RBP eCLIP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 STMN1P16949 149 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 BDNFP23560 247 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 YWHABP31946 246 aaKnown RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 ST13P50502 369 aaKnown RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF157P51786 506 aaPredicted RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 TRAF2Q12933 501 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 EME1Q96AY2 570 aa10.81□□□□□ -0.68
MSRB3-201ENST00000308259 ACSF2Q96CM8 615 aaPredicted RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 GBA2Q9HCG7 927 aaPredicted RBP10.81□□□□□ -0.68
MSRB3-201ENST00000308259 SNTNA6NMZ2 147 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 TUBA4AP68366 448 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MPP2Q14168 576 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MXRA8Q9BRK3 442 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MRPS26Q9BYN8 205 aaKnown RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 AAASQ9NRG9 546 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 ATPIF1Q9UII2 106 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 PACSIN3Q9UKS6 424 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 PPME1Q9Y570 386 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 LRRIQ4A6NIV6 560 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 KRT3P12035 628 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 LRPAP1P30533 357 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 ITGA8P53708 1063 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 TPD52P55327 224 aaPredicted RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 PDK1Q15118 436 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 SIX1Q15475 284 aaPredicted RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 SFT2D3Q587I9 215 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 GOLM1Q8NBJ4 401 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 TSPAN14Q8NG11 270 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 RNPEPQ9H4A4 650 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 STRIP2Q9ULQ0 834 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 INPP5FQ9Y2H2 1132 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 NOX1Q9Y5S8 564 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MIF4GDA9UHW6 222 aaKnown RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 RRM1P23921 792 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MAPK4P31152 587 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 RPS6P62753 249 aaKnown RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MSLNQ13421 630 aaPredicted RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MYLK3Q32MK0 819 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 ERO1BQ86YB8 467 aa10.8□□□□□ -0.68
MSRB3-201ENST00000308259 PARK7Q99497 189 aaKnown RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 MTO1Q9Y2Z2 717 aaKnown RBP10.8□□□□□ -0.68
MSRB3-201ENST00000308259 GLTPD2A6NH11 291 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 YDJCA8MPS7 323 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 PI4K2BG5E9Z4 385 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 PRKACAP17612 351 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 CD58P19256 250 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 RSBN1Q5VWQ0 802 aaPredicted RBP10.79□□□□□ -0.68
MSRB3-201ENST00000308259 SCARA3Q6AZY7 606 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 C11orf63Q6NUN7 778 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 OTOAQ7RTW8 1153 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 MIPEPQ99797 713 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 CCDC134Q9H6E4 229 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 EPS15L1Q9UBC2 864 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 PCYOX1Q9UHG3 505 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 HNRNPCL2B2RXH8 293 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 NPM3O75607 178 aaKnown RBP10.79□□□□□ -0.68
MSRB3-201ENST00000308259 MT-ND3P03897 115 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 SPIDRQ14159 915 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 PAOXQ6QHF9 649 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 POTEHQ6S545 545 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 VSTM1Q6UX27 236 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 FAM71AQ8IYT1 594 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 ULK2Q8IYT8 1036 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 ZNF786Q8N393 782 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 SLX1AQ9BQ83 275 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 FAM213AQ9BRX8 229 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 GBA3Q9H227 469 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 NOD1Q9Y239 953 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 AP4B1Q9Y6B7 739 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 DENND3A2RUS2 1198 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 TP73O15350 636 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 TKFCQ3LXA3 575 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 ATP13A4Q4VNC1 1196 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 SEZ6Q53EL9 994 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 AAGABQ6PD74 315 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 USP37Q86T82 979 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 ARID3BQ8IVW6 561 aaPredicted RBP10.79□□□□□ -0.68
MSRB3-201ENST00000308259 BSNDQ8WZ55 320 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 CD101Q93033 1021 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 ART4Q93070 314 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 TAAR1Q96RJ0 339 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 EXOC7Q9UPT5 735 aa10.79□□□□□ -0.68
MSRB3-201ENST00000308259 TMX2Q9Y320 296 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms