RNA–Protein interactions for RNA: ENST00000308008.10

RAPGEF6-202, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF6, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-202ENST00000308008 TXNDC11Q6PKC3 985 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 GALNT7Q86SF2 657 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 SMYD4Q8IYR2 804 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 LINC00469Q8N7U9 141 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 C19orf47Q8N9M1 422 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 RHBDD1Q8TEB9 315 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 LZICQ8WZA0 190 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 COA7Q96BR5 231 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 NMD3Q96D46 503 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 SIPA1Q96FS4 1042 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 NSMCE3Q96MG7 304 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 KCNC2Q96PR1 638 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CGRRF1Q99675 332 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 PRMT1Q99873 361 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ALG1Q9BT22 464 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 KIAA1683Q9H0B3 1180 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 RAB17Q9H0T7 212 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ASCC2Q9H1I8 757 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 SNX25Q9H3E2 840 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 EPB41L5Q9HCM4 733 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 SLAMF7Q9NQ25 335 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 KCNQ5Q9NR82 932 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 GMIPQ9P107 970 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 MTF2Q9Y483 593 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 MRC1P22897 1456 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 COL2A1P02458 1487 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 MYOCOSA0A1B0GUC4 107 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 B4E171 279 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 FSCN2O14926 492 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 TEX28O15482 410 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 DAPK3O43293 454 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CLASP2O75122 1294 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CLEC3AO75596 197 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 HNRNPA1P09651 372 aaKnown RBP eCLIP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CHRNB1P11230 501 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ICAM2P13598 275 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CXCR2P25025 360 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 FOXN2P32314 431 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 IGHMBP2P38935 993 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 SKIV2L2P42285 1042 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ME1P48163 572 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 RNF144AP50876 292 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 NR1H2P55055 460 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ARPC4P59998 168 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ZBTB16Q05516 673 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 KLHL30Q0D2K2 578 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 EIF4A2Q14240 407 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 NFE2L1Q14494 772 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 KCNJ8Q15842 424 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 IMMTQ16891 758 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CCDC122Q5T0U0 273 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 DMRTA1Q5VZB9 504 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ALKBH5Q6P6C2 394 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 POTEEQ6S8J3 1075 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 BRINP3Q76B58 766 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CHST15Q7LFX5 561 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 R3HCC1LQ7Z5L2 792 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 TMC3Q7Z5M5 1100 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 TTC39CQ8N584 583 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 WHAMMQ8TF30 809 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CENPIQ92674 756 aaPredicted RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 VPS33AQ96AX1 596 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 UIMC1Q96RL1 719 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 RUFY1Q96T51 708 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 DDX23Q9BUQ8 820 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 CDK19Q9BWU1 502 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 EBF3Q9H4W6 596 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 FANCEQ9HB96 536 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ZDHHC18Q9NUE0 388 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 DDX18Q9NVP1 670 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 METRNQ9UJH8 293 aa3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 AGO2Q9UKV8 859 aaKnown RBP3.37□□□□□ -1.87
RAPGEF6-202ENST00000308008 ZNF609O15014 1411 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 EDC4Q6P2E9 1401 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 OR5K4A6NMS3 321 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 ZBTB43O43298 467 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 CEP104O60308 925 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 P4HA1P13674 534 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 BPIP17213 487 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 EIF2AK2P19525 551 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 CRABP2P29373 138 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 SLC7A1P30825 629 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 STX2P32856 288 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 IL13P35225 146 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 PPARGP37231 505 aaPredicted RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 PAFAH1B1P43034 410 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 ALDH9A1P49189 494 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 CCT4P50991 539 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 DCAF7P61962 342 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 DSG1Q02413 1049 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 SLC39A14Q15043 492 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 ZNF174Q15697 407 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 PAN2Q504Q3 1202 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 PDCD4Q53EL6 469 aaKnown RBP3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 C4orf17Q53FE4 359 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 KAZNQ674X7 775 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 FAM171BQ6P995 826 aa3.36□□□□□ -1.87
RAPGEF6-202ENST00000308008 KLHL17Q6TDP4 642 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms