RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HPS4Q9NQG7 708 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 WDR35Q9P2L0 1181 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 STAP1Q9ULZ2 295 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NAALADL1Q9UQQ1 740 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BZW2Q9Y6E2 419 aaKnown RBP11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KANSL1LA0AUZ9 987 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SPECC1L-ADORA2AF8WAN1 911 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NCAM2O15394 837 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MSI1O43347 362 aaKnown RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 APOEP02649 317 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SERPING1P05155 500 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ADH5P11766 374 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 UNGP13051 313 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MMP8P22894 467 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GBP1P32455 592 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CTHP32929 405 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SOX9P48436 509 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MLLT6P55198 1093 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TBX4P57082 545 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 STARD6P59095 220 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RNASE9P60153 205 aaKnown RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NNTQ13423 1086 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HTR3DQ70Z44 454 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TMC6Q7Z403 805 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BMP8AQ7Z5Y6 402 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 XYLT1Q86Y38 959 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FBXL6Q8N531 539 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC30A5Q8TAD4 765 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DQX1Q8TE96 717 aaKnown RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 METTL5Q9NRN9 209 aaKnown RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ADAM22Q9P0K1 906 aa11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NDRG2Q9UN36 371 aaKnown RBP11.47□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ANKRD62A6NC57 917 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 LATS1O95835 1130 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PDGFBP01127 241 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CYBBP04839 570 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CYP17A1P05093 508 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SKILP12757 684 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DESP17661 470 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NOS2P35228 1153 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CHKAP35790 457 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SULT1E1P49888 294 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GAD2Q05329 585 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RING1Q06587 406 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DHCR24Q15392 516 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TAF5Q15542 800 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ANO4Q32M45 955 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 C2CD6Q53TS8 623 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 IER5LQ5T953 404 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 E4F1Q66K89 784 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CWF19L1Q69YN2 538 aaKnown RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ACAD10Q6JQN1 1059 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 Q6ZNB5 142 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZNF571Q7Z3V5 609 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TAC4Q86UU9 113 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GAS2L3Q86XJ1 694 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PHF13Q86YI8 300 aaPredicted RBP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DENND1CQ8IV53 801 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CNGA4Q8IV77 575 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PJA1Q8NG27 643 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RNF34Q969K3 372 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC2A13Q96QE2 648 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PCDHB18PQ96TA0 734 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NELL2Q99435 816 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SELENOOQ9BVL4 669 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FOXQ1Q9C009 403 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 LINC00597Q9H2U6 94 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DEF6Q9H4E7 631 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 LTB4R2Q9NPC1 389 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SPHK2Q9NRA0 654 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DDIT4Q9NX09 232 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 COX16Q9P0S2 106 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC12A6Q9UHW9 1150 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TLR6Q9Y2C9 796 aa11.46□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ATG2BQ96BY7 2078 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TYW5A2RUC4 315 aaKnown RBP11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 IRAK2O43187 625 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MFAP3LO75121 409 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 TRUB2O95900 331 aaKnown RBP11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 FYNP06241 537 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 CD72P21854 359 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 GJA4P35212 333 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 MATKP42679 507 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 SLC11A2P49281 568 aa11.45□□□□□ -0.58
CSPG4P1Y-201ENST00000306641 ZNF75DP51815 510 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms