RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 H2AFZP0C0S5 128 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 KPNA1P52294 538 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 GPC5P78333 572 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 USP4Q13107 963 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 MAMLD1Q13495 774 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 ZNF77Q15935 545 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 H2AFVQ71UI9 128 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 TAC4Q86UU9 113 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 TMEM139Q8IV31 216 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 YAF2Q8IY57 180 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 JOSD2Q8TAC2 188 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 LRRC3BQ96PB8 259 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 FAM204AQ9H8W3 233 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 THG1LQ9NWX6 298 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 HBS1LQ9Y450 684 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 EPN1Q9Y6I3 576 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 PDGFRAP16234 1089 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 RFC1P35251 1148 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 GRM2Q14416 872 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 MTF1Q14872 753 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 SPA17Q15506 151 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 C10orf76Q5T2E6 689 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 CC2D1AQ6P1N0 951 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 SLC44A3Q8N4M1 653 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 RIN3Q8TB24 985 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 CTNNBL1Q8WYA6 563 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 MCEEQ96PE7 176 aa25.53■■□□□ 1.68
HOXC9-201ENST00000303450 UHRF1Q96T88 793 aaPredicted RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 DDX23Q9BUQ8 820 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 MRPL47Q9HD33 250 aaKnown RBP25.53■■□□□ 1.68
HOXC9-201ENST00000303450 ZNF263O14978 683 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 NDUFA10O95299 355 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 IPO7O95373 1038 aaKnown RBP25.52■■□□□ 1.68
HOXC9-201ENST00000303450 GBP1P32455 592 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 PITX1P78337 314 aaPredicted RBP25.52■■□□□ 1.68
HOXC9-201ENST00000303450 TRIP4Q15650 581 aaPredicted RBP25.52■■□□□ 1.68
HOXC9-201ENST00000303450 SLC25A52Q3SY17 297 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 PPP1R15BQ5SWA1 713 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 RNF135Q8IUD6 432 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 RXFP2Q8WXD0 754 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 TRMT61BQ9BVS5 477 aaKnown RBP25.52■■□□□ 1.68
HOXC9-201ENST00000303450 PACSIN1Q9BY11 444 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 DDIT4Q9NX09 232 aa25.52■■□□□ 1.68
HOXC9-201ENST00000303450 LSM7Q9UK45 103 aaKnown RBP25.52■■□□□ 1.68
HOXC9-201ENST00000303450 SYNJ2BP-COX16A0A087WUM0 186 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 C2CD4BA6NLJ0 364 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 EIF3CLB5ME19 914 aaKnown RBP25.51■■□□□ 1.67
HOXC9-201ENST00000303450 M0QYT0 321 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 STC2O76061 302 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 LCA5LO95447 670 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 SDC4P31431 198 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 SULT1E1P49888 294 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 TBX4P57082 545 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 RPL7AP62424 266 aaKnown RBP25.51■■□□□ 1.67
HOXC9-201ENST00000303450 FCHO2Q0JRZ9 810 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 NNTQ13423 1086 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 TDGQ13569 410 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 TRNP1Q6NT89 227 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 RAD9BQ6WBX8 426 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 CCDC112Q8NEF3 446 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 PLD4Q96BZ4 506 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 CFAP57Q96MR6 1250 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 NPY6RQ99463 290 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 EIF3CQ99613 913 aaKnown RBP25.51■■□□□ 1.67
HOXC9-201ENST00000303450 LUC7LQ9NQ29 371 aaKnown RBP25.51■■□□□ 1.67
HOXC9-201ENST00000303450 COX16Q9P0S2 106 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 TLR6Q9Y2C9 796 aa25.51■■□□□ 1.67
HOXC9-201ENST00000303450 E2F8A0AVK6 867 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 GPD1P21695 349 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 MAGEA1P43355 309 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 NME3Q13232 169 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 LRRC8AQ8IWT6 810 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 NT5C3BQ969T7 300 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 CD320Q9NPF0 282 aa25.5■■□□□ 1.67
HOXC9-201ENST00000303450 SCAMP3O14828 347 aaKnown RBP25.49■■□□□ 1.67
HOXC9-201ENST00000303450 IRAK2O43187 625 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 SLC34A2O95436 690 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 IGLV3-25P01717 112 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 CYP1A2P05177 515 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 TMEM253P0C7T8 217 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 GDI1P31150 447 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 HARS2P49590 506 aaKnown RBP25.49■■□□□ 1.67
HOXC9-201ENST00000303450 ARHGAP29Q52LW3 1261 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 KIAA1958Q8N8K9 716 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 WBP2Q969T9 261 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 ARHGEF26Q96DR7 871 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 PDLIM2Q96JY6 352 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 TBCBQ99426 244 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 DCLK3Q9C098 648 aa25.49■■□□□ 1.67
HOXC9-201ENST00000303450 NRDCO43847 1150 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 PTMAP06454 111 aaKnown RBP25.48■■□□□ 1.67
HOXC9-201ENST00000303450 ATP11AP98196 1134 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 RING1Q06587 406 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 CCDC14Q49A88 953 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 HTR3DQ70Z44 454 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 RNF34Q969K3 372 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 NUP85Q9BW27 656 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 BRD9Q9H8M2 597 aa25.48■■□□□ 1.67
HOXC9-201ENST00000303450 DUS2Q9NX74 493 aaKnown RBP25.48■■□□□ 1.67
HOXC9-201ENST00000303450 INTUQ9ULD6 942 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms