RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 POMCP01189 267 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 HMGCRP04035 888 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 PTPN4P29074 926 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 ADCYAP1R1P41586 468 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 PLOD1Q02809 727 aaPredicted RBP16.83■□□□□ 0.29
BRD3-201ENST00000303407 ACAP1Q15027 740 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 N4BP2L1Q5TBK1 243 aaPredicted RBP16.83■□□□□ 0.29
BRD3-201ENST00000303407 FOXR2Q6PJQ5 311 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 PDGFCQ9NRA1 345 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 PCYOX1Q9UHG3 505 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 V9GYQ6 96 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 TBC1D4O60343 1298 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 CSE1LP55060 971 aaKnown RBP16.83■□□□□ 0.29
BRD3-201ENST00000303407 OXCT1P55809 520 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 GRTP1Q5TC63 336 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 TMEM139Q8IV31 216 aa16.83■□□□□ 0.29
BRD3-201ENST00000303407 SPDYE5A6NIY4 337 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 APOC4-APOC2K7ER74 178 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 APOC2P02655 101 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 GRK2P25098 689 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 CYLC2Q14093 348 aaPredicted RBP16.83■□□□□ 0.28
BRD3-201ENST00000303407 DPYSL3Q14195 570 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 SPDYE7PQ495Y7 208 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 AASDHQ4L235 1098 aaPredicted RBP16.83■□□□□ 0.28
BRD3-201ENST00000303407 FGFBP2Q9BYJ0 223 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 E9PBE3 544 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 TGFB1I1O43294 461 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 KLHL41O60662 606 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 TOMM70O94826 608 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 DDX5P17844 614 aaKnown RBP16.83■□□□□ 0.28
BRD3-201ENST00000303407 AXLP30530 894 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 SLC1A6P48664 564 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 MARSP56192 900 aaKnown RBP16.83■□□□□ 0.28
BRD3-201ENST00000303407 AMPD2Q01433 879 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 CRY2Q49AN0 593 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 SLC12A8A0AV02 714 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 PLSCR1O15162 318 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 IRF2BP1Q8IU81 584 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 DEFB106AQ8N104 65 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 KAT2BQ92831 832 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 TBC1D13Q9NVG8 400 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 WWOXQ9NZC7 414 aa16.83■□□□□ 0.28
BRD3-201ENST00000303407 LMO7Q8WWI1 1683 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 HEATR9A2RTY3 570 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 YWHAZP63104 245 aaKnown RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 HES6Q96HZ4 224 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 NID2Q14112 1375 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 KPNA6O60684 536 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 ACADSP16219 412 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 TPH1P17752 444 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 ITGB5P18084 799 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 MARCKSL1P49006 195 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 MRPS35P82673 323 aaKnown RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 TLK2Q86UE8 772 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 TUBGCP3Q96CW5 907 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 CNBD2Q96M20 576 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 CHCHD3Q9NX63 227 aaKnown RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 MAGEB16A2A368 324 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 STRNO43815 780 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 TNFSF9P41273 254 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 CSHL1Q14406 222 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 RRP1BQ14684 758 aaKnown RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 FUT11Q495W5 492 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 SPANXN3Q5MJ09 141 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 CARNMT1Q8N4J0 409 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 DLGAP2Q9P1A6 1054 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 TFE3P19532 575 aaPredicted RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 NPNTQ6UXI9 565 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 SMARCD1Q96GM5 515 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 CNDP1Q96KN2 507 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 SAE1Q9UBE0 346 aaPredicted RBP16.82■□□□□ 0.28
BRD3-201ENST00000303407 ACOT9Q9Y305 439 aa16.82■□□□□ 0.28
BRD3-201ENST00000303407 SERPIND1P05546 499 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 SNHG28P0DPA3 235 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 FAM136AQ96C01 138 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 DTNAQ9Y4J8 743 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 SYNDIG1LA6NDD5 238 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 SIGLEC16A6NMB1 481 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 LIASO43766 372 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 KIF1CO43896 1103 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 ATP9AO75110 1047 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 MAFO75444 373 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 EGFRP00533 1210 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 NFICP08651 508 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ITGB3BPQ13352 177 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 BNC2Q6ZN30 1099 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 TNIP2Q8NFZ5 429 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ADAM32Q8TC27 787 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 LZICQ8WZA0 190 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 COPS5Q92905 334 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 VPS50Q96JG6 964 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ZNF333Q96JL9 665 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 SRPK1Q96SB4 655 aaKnown RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 MTG1Q9BT17 334 aaPredicted RBP16.81■□□□□ 0.28
BRD3-201ENST00000303407 HACD1B0YJ81 288 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 RNF103O00237 685 aa16.81■□□□□ 0.28
BRD3-201ENST00000303407 ASS1P00966 412 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms