RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ELMSAN1Q6PJG2 1045 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 NPAS3Q8IXF0 933 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 PPM1EQ8WY54 764 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 ING5Q8WYH8 240 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 FGF13Q92913 245 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 CD101Q93033 1021 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 RSPRY1Q96DX4 576 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 PEBP4Q96S96 227 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 MYADMQ96S97 322 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 CNPY3Q9BT09 278 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 TASP1Q9H6P5 420 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 PIDD1Q9HB75 910 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 TMPRSS4Q9NRS4 437 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 GKN1Q9NS71 199 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 PIGVQ9NUD9 493 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 CD207Q9UJ71 328 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 GUCA1BQ9UMX6 200 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 MRPS23Q9Y3D9 190 aaKnown RBP9.9□□□□□ -0.82
RFX3-201ENST00000302303 USP15Q9Y4E8 981 aaPredicted RBP9.9□□□□□ -0.82
RFX3-201ENST00000302303 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 DENND4AQ7Z401 1863 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 CLUHO75153 1309 aa9.9□□□□□ -0.83
RFX3-201ENST00000302303 MACROD2A1Z1Q3 448 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 SOBPA7XYQ1 873 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 M0QYT0 321 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 ZNF197O14709 1029 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 NRDCO43847 1150 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 PRAMEF12O95522 483 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 FGF19O95750 216 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 HDCP19113 662 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 KCNA5P22460 613 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 FSHRP23945 695 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 IL1R2P27930 398 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 WEE1P30291 646 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 ATP5C1P36542 298 aaKnown RBP9.89□□□□□ -0.83
RFX3-201ENST00000302303 CXCR3P49682 368 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 KCNQ1P51787 676 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 TAS2R40P59535 323 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 ATP11AP98196 1134 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 EFEMP1Q12805 493 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 MESDQ14696 234 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 ATAT1Q5SQI0 421 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 GPR158Q5T848 1215 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 DCUN1D2Q6PH85 259 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 EP400NLQ6ZTU2 488 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 STRADAQ7RTN6 431 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
RFX3-201ENST00000302303 P2RY11Q96G91 374 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 FCRL2Q96LA5 508 aaPredicted RBP9.89□□□□□ -0.83
RFX3-201ENST00000302303 SMG9Q9H0W8 520 aaKnown RBP9.89□□□□□ -0.83
RFX3-201ENST00000302303 LUC7LQ9NQ29 371 aaKnown RBP9.89□□□□□ -0.83
RFX3-201ENST00000302303 MARCH2Q9P0N8 246 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 DNMT3LQ9UJW3 386 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 CCL26Q9Y258 94 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 ALG6Q9Y672 507 aa9.89□□□□□ -0.83
RFX3-201ENST00000302303 DOCK8Q8NF50 2099 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 KCNU1A8MYU2 1149 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 MYO1FO00160 1098 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 CAPN9O14815 690 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 KRT86O43790 486 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 PALMO75781 387 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 STC2O76061 302 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 SRGAP2BP0DMP2 458 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 RALAP11233 206 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 PFKLP17858 780 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 FCARP24071 287 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 PSMA2P25787 234 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 SDC4P31431 198 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 NOP2P46087 812 aaKnown RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 SULT1E1P49888 294 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 SLC25A11Q02978 314 aaKnown RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 PIGHQ14442 188 aaPredicted RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 ACAP1Q15027 740 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 ATP13A4Q4VNC1 1196 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 C10orf120Q5SQS8 335 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 NT5DC3Q86UY8 548 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 FAM172AQ8WUF8 416 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 MRPS31Q92665 395 aaKnown RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 USP13Q92995 863 aaPredicted RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 HLA-CQ95604 372 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 ASB16Q96NS5 453 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 TSGA10Q9BZW7 698 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 OLA1Q9NTK5 396 aaKnown RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 RRN3Q9NYV6 651 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 IP6K2Q9UHH9 426 aa9.88□□□□□ -0.83
RFX3-201ENST00000302303 XPO7Q9UIA9 1087 aaKnown RBP9.88□□□□□ -0.83
RFX3-201ENST00000302303 GFRA2O00451 464 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 ZSCAN12O43309 604 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 COMTP21964 271 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 DDX6P26196 483 aaKnown RBP eCLIP9.87□□□□□ -0.83
RFX3-201ENST00000302303 MIPP30301 263 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 MAN1A1P33908 653 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 MTHFRP42898 656 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 TFF2Q03403 129 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 NNTQ13423 1086 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 SMAD4Q13485 552 aaKnown RBP9.87□□□□□ -0.83
RFX3-201ENST00000302303 CDO1Q16878 200 aa9.87□□□□□ -0.83
RFX3-201ENST00000302303 LEXMQ3ZCV2 418 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms