RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 ALDH2P05091 517 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 FYNP06241 537 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 PECAM1P16284 738 aaPredicted RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 FGFR3P22607 806 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 BDNFP23560 247 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 RFC2P35250 354 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 MAGEA11P43364 429 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 BCAR1P56945 870 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 ROR1Q01973 937 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 DEUP1Q05D60 604 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 FAAP100Q0VG06 881 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 MRPL58Q14197 206 aaKnown RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 CA9Q16790 459 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 P3H1Q32P28 736 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 AGBL2Q5U5Z8 902 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 C4orf22Q6V702 233 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 GPRIN1Q7Z2K8 1008 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 ZCCHC9Q8N567 271 aaKnown RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 RSAD2Q8WXG1 361 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 HAUS1Q96CS2 278 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 RTP4Q96DX8 246 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 KCTD15Q96SI1 283 aaPredicted RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 ADAM33Q9BZ11 813 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 ADAM7Q9H2U9 754 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 EPB41L4BQ9H329 900 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 TMBIM4Q9HC24 238 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 AAASQ9NRG9 546 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 GPATCH2LQ9NWQ4 482 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 PSD3Q9NYI0 1048 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 VPS18Q9P253 973 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 ADAM28Q9UKQ2 775 aa12.47□□□□□ -0.41
TPM3-202ENST00000302206 TPX2Q9ULW0 747 aaKnown RBP12.47□□□□□ -0.41
TPM3-202ENST00000302206 SF3B1O75533 1304 aaKnown RBP eCLIP12.46□□□□□ -0.411e-6■■■■■ 152.9
TPM3-202ENST00000302206 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 BCLAF3A2AJT9 711 aaKnown RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 GOLGA6CA6NDK9 693 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 YJEFN3A6XGL0 299 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 E7ENQ6 273 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 F8W810 466 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 H3BRJ5 948 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 M0QYT0 321 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CAPN9O14815 690 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 USP17L7P0C7H9 530 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 MYZAPP0CAP1 466 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 GOLGA6DP0CG33 693 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 RBP3P10745 1247 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CYP2F1P24903 491 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 ARL4AP40617 200 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 HCAR3P49019 387 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 ZNF844Q08AG5 666 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 SMARCB1Q12824 385 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 GPS1Q13098 491 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CBLBQ13191 982 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 TERF2Q15554 542 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CEP85LQ5SZL2 805 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 EMC10Q5UCC4 262 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 SYPL2Q5VXT5 272 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 HOOK3Q86VS8 718 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CCDC185Q8N715 623 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 NDRG1Q92597 394 aaKnown RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 C8orf48Q96LL4 319 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 CSPG4P5Q96PW8 444 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 TMEM209Q96SK2 561 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 TMEM121Q9BTD3 319 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 DHX35Q9H5Z1 703 aaKnown RBP12.46□□□□□ -0.41
TPM3-202ENST00000302206 GOLGA6AQ9NYA3 693 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 DNAJB4Q9UDY4 337 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 PRKAG2Q9UGJ0 569 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 ADAM21Q9UKJ8 722 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 NAALADL1Q9UQQ1 740 aa12.46□□□□□ -0.41
TPM3-202ENST00000302206 TTC3P53804 2025 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 HACD1B0YJ81 288 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 H7C4K7 107 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 TNFRSF10BO14763 440 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 TRIM66O15016 1216 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 RIPK2O43353 540 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 FOSL2P15408 326 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ADRA1BP35368 520 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 CXCR3P49682 368 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 ATXN1P54253 815 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 TLE2Q04725 743 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 TCTN1Q2MV58 587 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 TTMPQ5BVD1 217 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 EFHC2Q5JST6 749 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 VARS2Q5ST30 1063 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 ZNF280DQ6N043 979 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 DARS2Q6PI48 645 aaKnown RBP12.45□□□□□ -0.42
TPM3-202ENST00000302206 FAM131BQ86XD5 332 aa12.45□□□□□ -0.42
TPM3-202ENST00000302206 CDKL3Q8IVW4 592 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms