RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 AKR1A1P14550 325 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 CYP2F1P24903 491 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 ARL4CP56559 192 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 DCAF6Q58WW2 860 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 MDH1BQ5I0G3 518 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 THEMIS2Q5TEJ8 643 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 CGB2Q6NT52 195 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 DEFB106AQ8N104 65 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 FBF1Q8TES7 1133 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 FAF2Q96CS3 445 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 TRIM56Q9BRZ2 755 aaKnown RBP22.75■■□□□ 1.23
TPM4-201ENST00000300933 GDAP2Q9NXN4 497 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 KLHL14Q9P2G3 628 aa22.75■■□□□ 1.23
TPM4-201ENST00000300933 GOLGA8RI6L899 631 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 L1CAMP32004 1257 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 CLCNKBP51801 687 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 TFDP2Q14188 446 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 PALM2Q8IXS6 379 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 CKAP2Q8WWK9 683 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 TRIB2Q92519 343 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 NAF1Q96HR8 494 aaKnown RBP22.74■■□□□ 1.23
TPM4-201ENST00000300933 TMEM237Q96Q45 408 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 MED10Q9BTT4 135 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 LGALS13Q9UHV8 139 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 CHRNA1P02708 482 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 LINGO3P0C6S8 592 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 AMPD1P23109 780 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 ATP5DP30049 168 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 ELK3P41970 407 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 MAP3K7CLP57077 242 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 C11orf91Q3C1V1 193 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 SV2CQ496J9 727 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 XKR4Q5GH76 650 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 HFE2Q6ZVN8 426 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 PAQR9Q6ZVX9 377 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 ANKLE1Q8NAG6 615 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 C3orf58Q8NDZ4 430 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 UTP4Q969X6 686 aaKnown RBP22.74■■□□□ 1.23
TPM4-201ENST00000300933 KCNK16Q96T55 309 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 KATNAL1Q9BW62 490 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 FOXP3Q9BZS1 431 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 AGO3Q9H9G7 860 aaKnown RBP22.74■■□□□ 1.23
TPM4-201ENST00000300933 RABGEF1Q9UJ41 708 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 AP4E1Q9UPM8 1137 aa22.74■■□□□ 1.23
TPM4-201ENST00000300933 ECHDC2Q86YB7 292 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 AGGF1Q8N302 714 aaeCLIP22.73■■□□□ 1.23
TPM4-201ENST00000300933 HASPINQ8TF76 798 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 RHOBTB2Q9BYZ6 727 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 TSPYL2Q9H2G4 693 aaPredicted RBP22.73■■□□□ 1.23
TPM4-201ENST00000300933 PRKAG3Q9UGI9 489 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 DPYSL4O14531 572 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 SETSIPP0DME0 302 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 GOT1P17174 413 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 MRPS6P82932 125 aaKnown RBP22.73■■□□□ 1.23
TPM4-201ENST00000300933 CAP1Q01518 475 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 NME3Q13232 169 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 SYPL2Q5VXT5 272 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 PCGF5Q86SE9 256 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 SPOCK2Q92563 424 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 TTC25Q96NG3 672 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 KCTD15Q96SI1 283 aaPredicted RBP22.73■■□□□ 1.23
TPM4-201ENST00000300933 NRDE2Q9H7Z3 1164 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 ZFYVE28Q9HCC9 887 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 MTMR10Q9NXD2 777 aa22.73■■□□□ 1.23
TPM4-201ENST00000300933 LAMA2P24043 3122 aaKnown RBP22.72■■□□□ 1.23
TPM4-201ENST00000300933 ZBED1O96006 694 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 ABHD2P08910 425 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 GNAT1P11488 350 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 PTPN1P18031 435 aaKnown RBP22.72■■□□□ 1.23
TPM4-201ENST00000300933 INHBEP58166 350 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 SLC26A9Q7LBE3 791 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 TRABD2AQ86V40 505 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 PDIK1LQ8N165 341 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 TMEM30AQ9NV96 361 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 APRTP07741 180 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 SCNN1GP51170 649 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 CACNA2D1P54289 1103 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 WDR4P57081 412 aaKnown RBP22.72■■□□□ 1.23
TPM4-201ENST00000300933 PDK2Q15119 407 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 PPP1R10Q96QC0 940 aaKnown RBP22.72■■□□□ 1.23
TPM4-201ENST00000300933 CEP41Q9BYV8 373 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 TRABDQ9H4I3 376 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 FAM105AQ9NUU6 356 aa22.72■■□□□ 1.23
TPM4-201ENST00000300933 DDX43Q9NXZ2 648 aaKnown RBP22.72■■□□□ 1.23
TPM4-201ENST00000300933 XPOTO43592 962 aaKnown RBP22.71■■□□□ 1.23
TPM4-201ENST00000300933 PDHA1P08559 390 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 PCBP1Q15365 356 aaKnown RBP eCLIP22.71■■□□□ 1.23
TPM4-201ENST00000300933 STK32AQ8WU08 396 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 SENP8Q96LD8 212 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.71■■□□□ 1.231e-7■■■■■ 26.8
TPM4-201ENST00000300933 MKI67P46013 3256 aaKnown RBP22.71■■□□□ 1.23
TPM4-201ENST00000300933 RALGAPA2Q2PPJ7 1873 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 MYBPHLA2RUH7 354 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 DCAF8L1A6NGE4 600 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 M0QZ92 97 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 UNC5CO95185 931 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 TARSP26639 723 aaKnown RBP22.71■■□□□ 1.23
TPM4-201ENST00000300933 STIP1P31948 543 aaKnown RBP22.71■■□□□ 1.23
TPM4-201ENST00000300933 PNPLA4P41247 253 aa22.71■■□□□ 1.23
TPM4-201ENST00000300933 FLT3LGP49771 235 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms