RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 STAM2O75886 525 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 THRAP10827 490 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 CD19P15391 556 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 XRCC1P18887 633 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 MMP8P22894 467 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 STAT2P52630 851 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 NR1H2P55055 460 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 IGBP1P78318 339 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 CRADDP78560 199 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 SULT2A1Q06520 285 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ORC1Q13415 861 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 PPM1LQ5SGD2 360 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ATG14Q6ZNE5 492 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 TMEM110Q86TL2 294 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 PHF13Q86YI8 300 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 NUP93Q8N1F7 819 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 DEPDC1BQ8WUY9 529 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 LENG8Q96PV6 779 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 WRNIP1Q96S55 665 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 PRDM16Q9HAZ2 1276 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 INIPQ9NRY2 104 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ZNFX1Q9P2E3 1918 aaKnown RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 BARX2Q9UMQ3 279 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 AFG3L2Q9Y4W6 797 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 PPME1Q9Y570 386 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 CEPT1Q9Y6K0 416 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 TMX2-CTNND1H3BSU7 103 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 KCNN4O15554 427 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 COX4I1P13073 169 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 XIAPP98170 497 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 C1QBPQ07021 282 aaKnown RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 TEDDM1Q5T9Z0 273 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 GPAT2Q6NUI2 795 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 MAVSQ7Z434 540 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 CPXCR1Q8N123 301 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 KCNK16Q96T55 309 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 PKP2Q99959 881 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 OXCT2Q9BYC2 517 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 ZNF358Q9NW07 568 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 SELENONQ9NZV5 590 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 TUBGCP4Q9UGJ1 667 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 TTLL3Q9Y4R7 772 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ZFXP17010 805 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 ZNF24P17028 368 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ACO1P21399 889 aaKnown RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 KDELR1P24390 212 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 TUBB3Q13509 450 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ZBTB41Q5SVQ8 909 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 TRIM50Q86XT4 487 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 C10orf107Q8IVU9 208 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 SMYD1Q8NB12 490 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 BHLHE22Q8NFJ8 381 aaPredicted RBP11.34□□□□□ -0.59
SNX20-201ENST00000300590 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 EME1Q96AY2 570 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 SPATA7Q9P0W8 599 aa11.34□□□□□ -0.59
SNX20-201ENST00000300590 DENRO43583 198 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 ZBTB14O43829 449 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 SNNO75324 88 aaPredicted RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 AMHP03971 560 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 PSMC3P17980 439 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 LIG4P49917 911 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 THOP1P52888 689 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 MAPK10P53779 464 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 YWHAZP63104 245 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 ROR1Q01973 937 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 CDO1Q16878 200 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 PPM1JQ5JR12 505 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 KRT80Q6KB66 452 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 POTEHQ6S545 545 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 KIAA0319LQ8IZA0 1049 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 LILRA2Q8N149 483 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 MPP5Q8N3R9 675 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 MXRA8Q9BRK3 442 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 NRDE2Q9H7Z3 1164 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 DDX56Q9NY93 547 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 LSM1O15116 133 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 KRT3P12035 628 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 COL6A2P12110 1019 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 P4HA1P13674 534 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 ATP1A4Q13733 1029 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 FASTKD5Q7L8L6 764 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 TNS4Q8IZW8 715 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 KCTD17Q8N5Z5 321 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 MARK4Q96L34 752 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 ZC3H12CQ9C0D7 883 aaKnown RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 WDR55Q9H6Y2 383 aaPredicted RBP11.33□□□□□ -0.6
SNX20-201ENST00000300590 THEGQ9P2T0 379 aa11.33□□□□□ -0.6
SNX20-201ENST00000300590 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms