RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
TTC17-202ENST00000299240 EFHC1Q5JVL4 640 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 PPP1R15BQ5SWA1 713 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 RSPO2Q6UXX9 243 aaPredicted RBP13.09□□□□□ -0.31
TTC17-202ENST00000299240 TMEM110Q86TL2 294 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 PALM2Q8IXS6 379 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
TTC17-202ENST00000299240 GDAP2Q9NXN4 497 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 ADAM28Q9UKQ2 775 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 LOXHD1Q8IVV2 1947 aa13.09□□□□□ -0.31
TTC17-202ENST00000299240 SETSIPP0DME0 302 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 NEFHP12036 1026 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 KRT15P19012 456 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 RPL22P35268 128 aaKnown RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 RAB27AP51159 221 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 SNX16P57768 344 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 FAAP100Q0VG06 881 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 ANKRD20A8PQ5CZ79 823 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 MICALCLQ6ZW33 695 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 SPRED2Q7Z698 418 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 SRRM1Q8IYB3 904 aaKnown RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 FBXO32Q969P5 355 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 HNRNPABQ99729 332 aaKnown RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 APOL5Q9BWW9 433 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 C12orf65Q9H3J6 166 aaKnown RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 NMUR1Q9HB89 426 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.31
TTC17-202ENST00000299240 GMIPQ9P107 970 aa13.08□□□□□ -0.31
TTC17-202ENST00000299240 XPO1O14980 1071 aaKnown RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 OPA1O60313 960 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 TSPAN3O60637 253 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 TUBBP07437 444 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 TPH1P17752 444 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 TAP1Q03518 808 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 EFTUD2Q15029 972 aaKnown RBP eCLIP13.08□□□□□ -0.322e-9■■□□□ 13.4
TTC17-202ENST00000299240 DCLRE1AQ6PJP8 1040 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 SPNS2Q8IVW8 549 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 TMEM169Q96HH4 297 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 VRTNQ9H8Y1 702 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 POPDC2Q9HBU9 364 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 TRIOO75962 3097 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 MATKP42679 507 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 STILQ15468 1287 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 ZKSCAN8Q15776 578 aaPredicted RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 CCNG2Q16589 344 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 FUT10Q6P4F1 479 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 RBM23Q86U06 439 aaKnown RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 TAC4Q86UU9 113 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 CRISPLD1Q9H336 500 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 KLHL8Q9P2G9 620 aaPredicted RBP13.08□□□□□ -0.32
TTC17-202ENST00000299240 RSPH14Q9UHP6 348 aa13.08□□□□□ -0.32
TTC17-202ENST00000299240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 TCRBV5S1A1TA0A578 114 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 PRRG1O14668 218 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 ATP9BO43861 1147 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 HSPA6P17066 643 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 EN2P19622 333 aaPredicted RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 LRPAP1P30533 357 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 HADHBP55084 474 aaKnown RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 POU5F1Q01860 360 aaKnown RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 SLC39A5Q6ZMH5 540 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 RNF19BQ6ZMZ0 732 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 ARHGEF18Q6ZSZ5 1173 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 C4orf33Q8N1A6 199 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 PLD5Q8N7P1 536 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 MGAMO43451 1857 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 MFSD11O43934 449 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 SLC10A2Q12908 348 aaPredicted RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 TAF10Q12962 218 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 PSMD5Q16401 504 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 PCSK7Q16549 785 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 BCL7CQ8WUZ0 217 aaPredicted RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 OR12D3Q9UGF7 316 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 FEZ2Q9UHY8 353 aaPredicted RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 FAM187AA6NFU0 413 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 WARSP23381 471 aaKnown RBP13.07□□□□□ -0.32
TTC17-202ENST00000299240 DAOAP59103 153 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 ZNF844Q08AG5 666 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 IKBKEQ14164 716 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 GPNMBQ14956 572 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 LRRC26Q2I0M4 334 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 BOLA3Q53S33 107 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 RFWD3Q6PCD5 774 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 MAIP1Q8WWC4 291 aa13.07□□□□□ -0.32
TTC17-202ENST00000299240 CSPG4P5Q96PW8 444 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms