RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ALDH3A1P30838 453 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 HNRNPH1P31943 449 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 FLT3LGP49771 235 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 HDAC4P56524 1084 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 YWHAZP63104 245 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 TAZQ16635 292 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 MFSD5Q6N075 450 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 DRICH1Q6PGQ1 229 aaPredicted RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 CEP128Q6ZU80 1094 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 GPATCH11Q8N954 259 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ARMC2Q8NEN0 867 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 SLC35B2Q8TB61 432 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ATXN2LQ8WWM7 1075 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 VPS11Q9H270 941 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ATXN3LQ9H3M9 355 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 EURLQ9NYK6 297 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 PHTF1Q9UMS5 762 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 STK10O94804 968 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SLC4A1P02730 911 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 FAM200BP0CF97 657 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 TARSP26639 723 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 STIP1P31948 543 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 FOXN2P32314 431 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 GMPRP36959 345 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 RGS2P41220 211 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 TMPRSS15P98073 1019 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SV2CQ496J9 727 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ZCCHC23Q6ZST2 131 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 PRPF39Q86UA1 669 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 LRRC6Q86X45 466 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 MCRS1Q96EZ8 462 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SNX27Q96L92 541 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 TMEM237Q96Q45 408 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 MECRQ9BV79 373 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 NRDE2Q9H7Z3 1164 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SLC40A1Q9NP59 571 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 EEF2KO00418 725 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 CAPN15O75808 1086 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 METTL18O95568 372 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 TOP3BO95985 862 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 GRIK1P39086 918 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 CPA2P48052 419 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 WDR4P57081 412 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SESN3P58005 492 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 GPX6P59796 221 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 GRB14Q14449 540 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 EFHC2Q5JST6 749 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 PPP1R15BQ5SWA1 713 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 FYB2Q5VWT5 728 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 CST9Q5W186 159 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 C16orf46Q6P387 395 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 OSTM1Q86WC4 334 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ANKRD52Q8NB46 1076 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 PHACTR1Q9C0D0 580 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ZFYVE28Q9HCC9 887 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 DRG1Q9Y295 367 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 TCRBV9S1A1TA0A576 114 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SLC15A5A6NIM6 579 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 F8W810 466 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SCAMP3O14828 347 aaKnown RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 POU5F1BQ06416 359 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 CRHR2Q13324 411 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ANKRD20A3Q5VUR7 823 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 IFNLR1Q8IU57 520 aaPredicted RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 MPP5Q8N3R9 675 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 NKD2Q969F2 451 aaPredicted RBP9.63□□□□□ -0.87
PRDM9-201ENST00000296682 ADAM2Q99965 735 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SYT15Q9BQS2 421 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 PAK5Q9P286 719 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 GJD2Q9UKL4 321 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 SHOC2Q9UQ13 582 aa9.63□□□□□ -0.87
PRDM9-201ENST00000296682 WDR27A2RRH5 827 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 ALOX15BO15296 676 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 SNX3O60493 162 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 BGNP21810 368 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 OR1G1P47890 313 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 TPI1P60174 286 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KYAT1Q16773 422 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 TRMT10BQ6PF06 316 aaKnown RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 POLNQ7Z5Q5 900 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 CCDC91Q7Z6B0 441 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 NDUFAF2Q8N183 169 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 LINC01465Q8N7H1 131 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 NIPA2Q8N8Q9 360 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 COLGALT1Q8NBJ5 622 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 CMASQ8NFW8 434 aaPredicted RBP9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KCNV2Q8TDN2 545 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 SHCBP1LQ9BZQ2 653 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 ADAMTS10Q9H324 1103 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KLC4Q9NSK0 619 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 HAO1Q9UJM8 370 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 KIAA1257Q9ULG3 409 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 STAP1Q9ULZ2 295 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 NME7Q9Y5B8 376 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 IQANK1A0A1B0GTG1 560 aa9.62□□□□□ -0.87
PRDM9-201ENST00000296682 YJEFN3A6XGL0 299 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms