RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 NPAS4Q8IUM7 802 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 THEM5Q8N1Q8 247 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 DNAJC5GQ8N7S2 189 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 FAM71DQ8N9W8 422 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 PGAP3Q96FM1 320 aaPredicted RBP9.51□□□□□ -0.89
PDPN-201ENST00000294489 C9orf72Q96LT7 481 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 EPN3Q9H201 632 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 NRDE2Q9H7Z3 1164 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 GPATCH2LQ9NWQ4 482 aa9.51□□□□□ -0.89
PDPN-201ENST00000294489 H7C0C1 242 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 NDUFAB1O14561 156 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 TCEA3O75764 348 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 ABHD2P08910 425 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 ZFXP17010 805 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 NOS2P35228 1153 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 RFC2P35250 354 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 ATP5OP48047 213 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 MAP3K7CLP57077 242 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 YWHAZP63104 245 aaKnown RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 DPYSL2Q16555 572 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 C1orf228Q6PIY5 440 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 GPRIN1Q7Z2K8 1008 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 UNC45BQ8IWX7 931 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 PLD5Q8N7P1 536 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 HIPK3Q9H422 1215 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 DHX35Q9H5Z1 703 aaKnown RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 C10orf88Q9H8K7 445 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 DNAJB4Q9UDY4 337 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 STAP1Q9ULZ2 295 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 A0A087WUV0 522 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 CFAP69A5D8W1 941 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 TBC1D4O60343 1298 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 PQBP1O60828 265 aaKnown RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 IBSPP21815 317 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 FGFR3P22607 806 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 RPL22P35268 128 aaKnown RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 IFI35P80217 286 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 HIF1AQ16665 826 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 SLC9A4Q6AI14 798 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 FBXO46Q6PJ61 603 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 NPNTQ6UXI9 565 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 PRCCQ92733 491 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 SELENOSQ9BQE4 189 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 PHACTR1Q9C0D0 580 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 PRDM16Q9HAZ2 1276 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 MARCH5Q9NX47 278 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 AP4E1Q9UPM8 1137 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 HEY1Q9Y5J3 304 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 ZNF638Q14966 1978 aaKnown RBP9.5□□□□□ -0.89
PDPN-201ENST00000294489 KIAA1671Q9BY89 1806 aa9.5□□□□□ -0.89
PDPN-201ENST00000294489 MMP13P45452 471 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 GJA8P48165 433 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 NDUFV1P49821 464 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 SULT1E1P49888 294 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 TKTL1P51854 596 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ARL4CP56559 192 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 EIF4EBP2Q13542 120 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 TRIM60Q495X7 471 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 DCAF6Q58WW2 860 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 CTU1Q7Z7A3 348 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 DEFB106AQ8N104 65 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 TMEM209Q96SK2 561 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 KCNK16Q96T55 309 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 MRPL9Q9BYD2 267 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 PPANQ9NQ55 473 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 MTMR10Q9NXD2 777 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 PRDM4Q9UKN5 801 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 E7EVH7 732 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 TNFRSF10BO14763 440 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 NRP1O14786 923 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ALOX15BO15296 676 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 TRAPPC3O43617 180 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 CDH16O75309 829 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 CYP2F1P24903 491 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 L1CAMP32004 1257 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 BASP1P80723 227 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 TLE2Q04725 743 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 PDIA2Q13087 525 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 CA9Q16790 459 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 PAN2Q504Q3 1202 aaKnown RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 TNFAIP8L3Q5GJ75 292 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ZBED8Q8IZ13 594 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 PCDH19Q8TAB3 1148 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 CPT1BQ92523 772 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 SLC9A7Q96T83 725 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 RABEP2Q9H5N1 569 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 POPDC2Q9HBU9 364 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 DMAP1Q9NPF5 467 aaPredicted RBP9.49□□□□□ -0.89
PDPN-201ENST00000294489 RRN3Q9NYV6 651 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 RSPH14Q9UHP6 348 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 FZD10Q9ULW2 581 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 BRCA2P51587 3418 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ZBED1O96006 694 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 ARL4AP40617 200 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 AIF1P55008 147 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 CBLBQ13191 982 aa9.49□□□□□ -0.89
PDPN-201ENST00000294489 PKN2Q16513 984 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms