RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SUSD6Q92537 303 aa12.77□□□□□ -0.37
SLX4-201ENST00000294008 DPP3Q9NY33 737 aa12.77□□□□□ -0.37
SLX4-201ENST00000294008 MFAP3LO75121 409 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RTN2O75298 545 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 ALOX12P18054 663 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 KCNJ5P48544 419 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RANBP17Q9H2T7 1088 aaKnown RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 PXMP2Q9NR77 195 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 TYMPP19971 482 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 SCNN1AP37088 669 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 OMPP47874 163 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 PKP1Q13835 747 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 DNAJC14Q6Y2X3 702 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ERP27Q96DN0 273 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 GAS2L1Q99501 681 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ADGRE3Q9BY15 652 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 WDR19Q8NEZ3 1342 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 CNTNAP2Q9UHC6 1331 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 CYB561D2O14569 222 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 MC1RQ01726 317 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RASAL3Q86YV0 1011 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 TRIM51Q9BSJ1 452 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 DSN1Q9H410 356 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 DPP7Q9UHL4 492 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 SNAP23O00161 211 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 LIN7AO14910 233 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ZNF432O94892 652 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 TOP3BO95985 862 aaKnown RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ALDH2P05091 517 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 SKP1P63208 163 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 IRX1P78414 480 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ATP2C1P98194 919 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 ZNF655Q8N720 491 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 CXorf40AQ8TE69 158 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 KCNH1O95259 989 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 IGFALSP35858 605 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 STARP49675 285 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RASGEF1AQ8N9B8 481 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 TOP1MTQ969P6 601 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 RBM15Q96T37 977 aaKnown RBP eCLIP12.76□□□□□ -0.37
SLX4-201ENST00000294008 TIMM13Q9Y5L4 95 aaPredicted RBP12.76□□□□□ -0.37
SLX4-201ENST00000294008 ANXA9O76027 345 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 PPM1AP35813 382 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 ABL2P42684 1182 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 LNX2Q8N448 690 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 IL17RAQ96F46 866 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 PPP1R2P1Q96PQ5 205 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 PCDHA11Q9Y5I1 949 aa12.76□□□□□ -0.37
SLX4-201ENST00000294008 UTYO14607 1347 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ERCC2P18074 760 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ALAS2P22557 587 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ZNF248Q8NDW4 579 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 SERPINB12Q96P63 405 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 C10orf88Q9H8K7 445 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 STOML2Q9UJZ1 356 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 PDS5AQ29RF7 1337 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 TRPC5OSA6NMA1 111 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 SEPT4O43236 478 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 AMHP03971 560 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 GIMD1P0DJR0 217 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 POLR2EP19388 210 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 NFKB1P19838 968 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 GDI2P50395 445 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 GEMP55040 296 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.37
SLX4-201ENST00000294008 TSNQ15631 228 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 SEPT1Q8WYJ6 367 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 NRDE2Q9H7Z3 1164 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ELOVL2Q9NXB9 296 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 IL13P35225 146 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 RAP1GAPP47736 663 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 MASP1P48740 699 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 SERPINB9P50453 376 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 PRKCEQ02156 737 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 TXNRD1Q16881 649 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 POTEAQ6S8J7 498 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 LRRC70Q7Z2Q7 622 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 KIF2BQ8N4N8 673 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 CRYL1Q9Y2S2 319 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 TP73O15350 636 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 EPORP19235 508 aa12.75□□□□□ -0.37
SLX4-201ENST00000294008 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
SLX4-201ENST00000294008 ATXN1P54253 815 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms