RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CNTNAP3BQ96NU0 1288 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 CNTNAP3Q9BZ76 1288 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 ULBP1Q9BZM6 244 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 FBXO10Q9UK96 956 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 TSPAN16Q9UKR8 245 aa26.48■■□□□ 1.83
U2AF1-201ENST00000291552 CIZ1Q9ULV3 898 aaPredicted RBP26.48■■□□□ 1.83
U2AF1-201ENST00000291552 KMT2BQ9UMN6 2715 aaPredicted RBP26.47■■□□□ 1.83
U2AF1-201ENST00000291552 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 BMP6P22004 513 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 CORO1AP31146 461 aaKnown RBP26.47■■□□□ 1.83
U2AF1-201ENST00000291552 PTGER3P43115 390 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 DGKGP49619 791 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 TKTL1P51854 596 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 YWHAGP61981 247 aaKnown RBP eCLIP26.47■■□□□ 1.83
U2AF1-201ENST00000291552 LRMPQ12912 555 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 PM20D1Q6GTS8 502 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 KIAA1211LQ6NV74 962 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 TMEFF1Q8IYR6 380 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 ERLEC1Q96DZ1 483 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 SPACA7Q96KW9 195 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 CDK5RAP1Q96SZ6 601 aaKnown RBP26.47■■□□□ 1.83
U2AF1-201ENST00000291552 CEP295Q9C0D2 2601 aa26.47■■□□□ 1.83
U2AF1-201ENST00000291552 XPO1O14980 1071 aaKnown RBP26.46■■□□□ 1.83
U2AF1-201ENST00000291552 KCNA4P22459 653 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 FMO5P49326 533 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 BCAT1P54687 386 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 FYB2Q5VWT5 728 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 ARMCX6Q7L4S7 300 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 DDX1Q92499 740 aaKnown RBP26.46■■□□□ 1.83
U2AF1-201ENST00000291552 GABRG3Q99928 467 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 MARCH2Q9P0N8 246 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 CALCOCO1Q9P1Z2 691 aa26.46■■□□□ 1.83
U2AF1-201ENST00000291552 AGO1Q9UL18 857 aaKnown RBP26.46■■□□□ 1.83
U2AF1-201ENST00000291552 O00370 1275 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 PSMA7O14818 248 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 ZBED1O96006 694 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 COG7P83436 770 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 SGO2Q562F6 1265 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 TTI2Q6NXR4 508 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 NUDT18Q6ZVK8 323 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 LPCAT2Q7L5N7 544 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 PGBD3Q8N328 593 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 ARHGAP18Q8N392 663 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 PIGKQ92643 395 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 ZSWIM1Q9BR11 485 aa26.45■■□□□ 1.82
U2AF1-201ENST00000291552 LSM14BQ9BX40 385 aaKnown RBP26.45■■□□□ 1.82
U2AF1-201ENST00000291552 PCDH15Q96QU1 1955 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 CD19P15391 556 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 BST2Q10589 180 aaKnown RBP26.44■■□□□ 1.82
U2AF1-201ENST00000291552 PKDCCQ504Y2 493 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 ELOA2Q8IYF1 753 aaPredicted RBP26.44■■□□□ 1.82
U2AF1-201ENST00000291552 CHPFQ8IZ52 775 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 UBA3Q8TBC4 463 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 IPO4Q8TEX9 1081 aaKnown RBP26.44■■□□□ 1.82
U2AF1-201ENST00000291552 TFAP2BQ92481 460 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 KAT5Q92993 513 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 DHTKD1Q96HY7 919 aaPredicted RBP26.44■■□□□ 1.82
U2AF1-201ENST00000291552 CEP63Q96MT8 703 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 GTPBP4Q9BZE4 634 aaKnown RBP26.44■■□□□ 1.82
U2AF1-201ENST00000291552 TMEM74BQ9NUR3 256 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 CACNA2D2Q9NY47 1150 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 ZNF510Q9Y2H8 683 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 RAD54BQ9Y620 910 aa26.44■■□□□ 1.82
U2AF1-201ENST00000291552 MUC22E2RYF6 1773 aaPredicted RBP26.43■■□□□ 1.82
U2AF1-201ENST00000291552 SLC12A8A0AV02 714 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 C4orf47A7E2U8 309 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 PPP1R3GB7ZBB8 358 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 GABBR2O75899 941 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 NDUFV2P19404 249 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 MFAP3P55082 362 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 ADIGQ0VDE8 80 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 N4BP2L1Q5TBK1 243 aaPredicted RBP26.43■■□□□ 1.82
U2AF1-201ENST00000291552 RSRC2Q7L4I2 434 aaKnown RBP26.43■■□□□ 1.82
U2AF1-201ENST00000291552 DENND1CQ8IV53 801 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 FAM217AQ8IXS0 508 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 LMO3Q8TAP4 145 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 DCLK3Q9C098 648 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 SLC6A17Q9H1V8 727 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 METTL14Q9HCE5 456 aaKnown RBP26.43■■□□□ 1.82
U2AF1-201ENST00000291552 CLEC4EQ9ULY5 219 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 SLC27A6Q9Y2P4 619 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 CACNA1EQ15878 2313 aa26.43■■□□□ 1.82
U2AF1-201ENST00000291552 ATXN2Q99700 1313 aaKnown RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 USP24Q9UPU5 2620 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 WASH3PC4AMC7 463 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 CDX4O14627 284 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 KHNYNO15037 678 aaKnown RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 PMM2O15305 246 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 MAP3K13O43283 966 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 VDRP11473 427 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 TBXAS1P24557 533 aaPredicted RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 YWHAEP62258 255 aaKnown RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 IRX4P78413 519 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 GEN1Q17RS7 908 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 KLHL10Q6JEL2 608 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 CD93Q9NPY3 652 aa26.42■■□□□ 1.82
U2AF1-201ENST00000291552 HOOK1Q9UJC3 728 aaKnown RBP26.42■■□□□ 1.82
U2AF1-201ENST00000291552 IGHV1OR15-9A0A0B4J2B8 117 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 YJEFN3A6XGL0 299 aa26.41■■□□□ 1.82
U2AF1-201ENST00000291552 E7ENQ6 273 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms