RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MRNIPQ6NTE8 343 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ERAP2Q6P179 960 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 NUDT18Q6ZVK8 323 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 RTL3Q8N8U3 475 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 VPS33AQ96AX1 596 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 GALNT8Q9NY28 637 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 R3HDM2Q9Y2K5 976 aaKnown RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 MAP3K6O95382 1288 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ITGAXP20702 1163 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF57Q68EA5 555 aaPredicted RBP11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 UNC45BQ8IWX7 931 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 SEPHS2Q99611 448 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 NIF3L1Q9GZT8 377 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 GPRC5DQ9NZD1 345 aa11.05□□□□□ -0.64
PKNOX1-201ENST00000291547 PDLIM1O00151 329 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PRLRP16471 622 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ARPC4P59998 168 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 SPANXN2Q5MJ10 180 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PDPK2PQ6A1A2 396 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 TSHZ1Q6ZSZ6 1077 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 CCNJLQ8IV13 435 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 KBTBD2Q8IY47 623 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ARL10Q8N8L6 244 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 KYQ8NBH2 561 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF512Q96ME7 567 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PIF1Q9H611 641 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 CAPN6Q9Y6Q1 641 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 DUSP10Q9Y6W6 482 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 TRIM43BA6NCK2 446 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 NCF1BA6NI72 391 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 NCF1CA8MVU1 366 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 BAIAP3O94812 1187 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 TNFAIP8O95379 198 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 NCF1P14598 390 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ERVK-24P63145 666 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PKN2Q16513 984 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 C1orf131Q8NDD1 294 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 GDPD5Q8WTR4 605 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 RORBQ92753 470 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PPP1R14AQ96A00 147 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 MTFR1LQ9H019 292 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 SLCO1B7G3V0H7 640 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 MT-CO1P00395 513 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 CPA3P15088 417 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 KLRK1P26718 216 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 GSTA3Q16772 222 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 KCNT1Q5JUK3 1230 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 BLOC1S5Q8TDH9 187 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 AGAP11Q8TF27 550 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM120BQ96EK7 910 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 MAGED4Q96JG8 741 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 NMRK1Q9NWW6 199 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 MBD2Q9UBB5 411 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 STON1Q9Y6Q2 735 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 SDR42E2A6NKP2 422 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 FAM20BO75063 409 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 FDX1P10109 184 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 CHI3L1P36222 383 aaPredicted RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 ANXA11P50995 505 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 MTTPP55157 894 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 UGT3A1Q6NUS8 523 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 DENND5BQ6ZUT9 1274 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 SLC26A11Q86WA9 606 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 LRRC71Q8N4P6 559 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 STKLD1Q8NE28 680 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 TRPC4APQ8TEL6 797 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 KCND2Q9NZV8 630 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 WHRNQ9P202 907 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 RPL26L1Q9UNX3 145 aaKnown RBP11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 CACNA1FO60840 1977 aa11.04□□□□□ -0.64
PKNOX1-201ENST00000291547 PNMA8CA0A1B0GUJ8 204 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ONECUT3O60422 494 aaPredicted RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 FYNP06241 537 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 TXNP10599 105 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 DARSP14868 501 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ACAD10Q6JQN1 1059 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ENGASEQ8NFI3 743 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 LENG1Q96BZ8 264 aaPredicted RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 NCKIPSDQ9NZQ3 722 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ATG7O95352 703 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 CPSF4O95639 269 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 NCAM1P13591 858 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ZNF618Q5T7W0 954 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 CYP4Z1Q86W10 505 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 B3GALNT2Q8NCR0 500 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 ATP8B4Q8TF62 1192 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 MMP19Q99542 508 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 NAT9Q9BTE0 207 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 PRRG3Q9BZD7 231 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 MYRFQ9Y2G1 1151 aa11.03□□□□□ -0.64
PKNOX1-201ENST00000291547 TMED5Q9Y3A6 229 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms