RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 SLC39A10Q9ULF5 831 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 AP4S1Q9Y587 144 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 KCNK1O00180 336 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 TCF4P15884 667 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 ACAT1P24752 427 aaKnown RBP12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 GLRBP48167 497 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 TBL3Q12788 808 aaKnown RBP12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 PDGFDQ9GZP0 370 aaPredicted RBP12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 LRRC4CQ9HCJ2 640 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 XPNPEP1Q9NQW7 623 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 SEPT3Q9UH03 358 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 KAT6AQ92794 2004 aa12.93□□□□□ -0.34
SLC6A1-201ENST00000287766 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 EME2A4GXA9 379 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 C2orf71A6NGG8 1288 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ZSCAN9O15535 394 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 PGM3O95394 542 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 AMPD1P23109 780 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 DEFA1P59665 94 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 DEFA3P59666 94 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 DLK2Q6UY11 383 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 RFWD2Q8NHY2 731 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF483Q8TF39 744 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 PPP2R3CQ969Q6 453 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 TLCD1Q96CP7 247 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM193BQ96PV7 902 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 SRPK1Q96SB4 655 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 TASP1Q9H6P5 420 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 IL1RAPL1Q9NZN1 696 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 BLOC1S6Q9UL45 172 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 EEF2KO00418 725 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 EGFRP00533 1210 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 CYP2C9P11712 490 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MAPK10P53779 464 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 NCALDP61601 193 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 TGFB2P61812 414 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MRPL28Q13084 256 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 DPYSL3Q14195 570 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MAPK11Q15759 364 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 PCSK7Q16549 785 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 KCNV1Q6PIU1 500 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ZBTB46Q86UZ6 589 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 OSMRQ99650 979 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 BBS2Q9BXC9 721 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 SNTG2Q9NY99 539 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 TIMM13Q9Y5L4 95 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 LAMB4A4D0S4 1761 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 GOLGA8TH3BQL2 631 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MFN2O95140 757 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MAPRE2Q15555 327 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 EML3Q32P44 896 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 FITM2Q8N6M3 262 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 AP4E1Q9UPM8 1137 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MEI4A8MW99 385 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 FCHO1O14526 889 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 RPS12P25398 132 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 AVPR1AP37288 418 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 USP10Q14694 798 aaKnown RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 SPDYCQ5MJ68 293 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 C16orf89Q6UX73 402 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 MOB2Q70IA6 237 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 RNF148Q8N7C7 305 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ANKRD27Q96NW4 1050 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 FBXO6Q9NRD1 293 aaPredicted RBP12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC17A7Q9P2U7 560 aa12.92□□□□□ -0.34
SLC6A1-201ENST00000287766 ADGRA3Q8IWK6 1321 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 hCG_1818297A0A087WSY0 165 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 FAM237BA0A1B0GVD1 139 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 DDNO94850 711 aaPredicted RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 NCAM1P13591 858 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 CYP2F1P24903 491 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 NUP107P57740 925 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 DCTN2Q13561 401 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 SLC1A5Q15758 541 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ZC3H12AQ5D1E8 599 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 DEPDC1Q5TB30 811 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 HOMEZQ8IX15 550 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 PLEKHA5Q9HAU0 1116 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 OLA1Q9NTK5 396 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 GRID1Q9ULK0 1009 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ADM5C9JUS6 153 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ACKR2O00590 384 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 MAGEB2O15479 319 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 CD48P09326 243 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 HSDL1Q3SXM5 330 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 PTPN20Q4JDL3 420 aa12.91□□□□□ -0.34
SLC6A1-201ENST00000287766 ZPBP2Q6X784 338 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms