RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 KYNUQ16719 465 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 IFI44LQ53G44 452 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 CASC4Q6P4E1 433 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 SZRD1Q7Z422 152 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 SESTD1Q86VW0 696 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TNIP2Q8NFZ5 429 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 UHMK1Q8TAS1 419 aaKnown RBP2.91□□□□□ -1.94
CHD1-201ENST00000284049 BCAS4Q8TDM0 211 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 PIGOQ8TEQ8 1089 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 GDAP1L1Q96MZ0 367 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TNMDQ9H2S6 317 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 NELFAQ9H3P2 528 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 PRDM6Q9NQX0 595 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 SAE1Q9UBE0 346 aaPredicted RBP2.91□□□□□ -1.94
CHD1-201ENST00000284049 FTSJ1Q9UET6 329 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 MARF1Q9Y4F3 1742 aaKnown RBP2.91□□□□□ -1.94
CHD1-201ENST00000284049 CTAGE9A4FU28 777 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 KLK10O43240 276 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 HNRNPRO43390 633 aaKnown RBP2.91□□□□□ -1.94
CHD1-201ENST00000284049 GASTP01350 101 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 GHRP10912 638 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 IL2RBP14784 551 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TSSK4Q6SA08 328 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 PPP1R21Q6ZMI0 780 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 RNF152Q8N8N0 203 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 USP38Q8NB14 1042 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 FAM46DQ8NEK8 389 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 DNAAF1Q8NEP3 725 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 ASB2Q96Q27 587 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 FOXB1Q99853 325 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TMPRSS13Q9BYE2 586 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 PRDM8Q9NQV8 689 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 ERVK13-1Q9NX77 482 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TSPYL4Q9UJ04 414 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 TRPV2Q9Y5S1 764 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 NHSL1Q5SYE7 1610 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 SMG6Q86US8 1419 aaKnown RBP2.91□□□□□ -1.94
CHD1-201ENST00000284049 NUP155O75694 1391 aa2.91□□□□□ -1.94
CHD1-201ENST00000284049 PYCARD-AS1I3L0S3 204 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 DVL2O14641 736 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 PGRMC2O15173 223 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 PROM1O43490 865 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 MOCS3O95396 460 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 FERP16591 822 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 TMEM11P17152 192 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 GAP43P17677 238 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 CXCR5P32302 372 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 FXR1P51114 621 aaKnown RBP eCLIP2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZNF135P52742 658 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 MTTPP55157 894 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 BPIFB3P59826 476 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 TARDBPQ13148 414 aaKnown RBP eCLIP2.9□□□□□ -1.943e-8■■■■■ 28.2
CHD1-201ENST00000284049 ACVR2BQ13705 512 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 E2F5Q15329 346 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 DCAF17Q5H9S7 520 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZNF804AQ7Z570 1209 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 VPS52Q8N1B4 723 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 NFKBIDQ8NI38 313 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 SCAMP5Q8TAC9 235 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ABHD5Q8WTS1 349 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZBTB26Q9HCK0 441 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 GIMAP4Q9NUV9 329 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 NDFIP2Q9NV92 336 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 PEMTQ9UBM1 199 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 AJAP1Q9UKB5 411 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 SIT1Q9Y3P8 196 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ANKARQ7Z5J8 1434 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZNF831Q5JPB2 1677 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 EDDM13A0A1B0GTR0 161 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 MBD3L4A6NDZ8 208 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 MBD3L3A6NE82 208 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 F5H0A9 414 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 FGF10O15520 208 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 DYNC1LI2O43237 492 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 GOSR1O95249 250 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 PDE8BO95263 885 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 PLATP00750 562 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 IRF1P10914 325 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 TYRP14679 529 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 EGR1P18146 543 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 HK1P19367 917 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 KLRK1P26718 216 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 EPHB3P54753 998 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 EIF4A1P60842 406 aaKnown RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 TNK2Q07912 1038 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZRSR1Q15695 479 aaKnown RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 UGP2Q16851 508 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 SLC5A9Q2M3M2 681 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 OLFML2BQ68BL8 750 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 ZNF529Q6P280 563 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 SLC46A3Q7Z3Q1 461 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 MIB1Q86YT6 1006 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 CCDC105Q8IYK2 499 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 C2CD4AQ8NCU7 369 aaPredicted RBP2.9□□□□□ -1.94
CHD1-201ENST00000284049 TBC1D15Q8TC07 691 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 URGCPQ8TCY9 931 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 KBTBD7Q8WVZ9 684 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 FAM149B1Q96BN6 582 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 Q96M66 194 aa2.9□□□□□ -1.94
CHD1-201ENST00000284049 DCLRE1CQ96SD1 692 aaKnown RBP2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms